RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-207ENST00000494090 PHTF1Q9UMS5 762 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TCRBV5S4A2TA0A5A2 114 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 F8VZ95 297 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 H0Y626 953 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 GPR182O15218 404 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TRIM16O95361 564 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 KCNA4P22459 653 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TCF7P36402 384 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-207ENST00000494090 MYBPC2Q14324 1141 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 LRRC36Q1X8D7 754 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 TTLL9Q3SXZ7 439 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 PRPF18Q99633 342 aaKnown RBP19.9■□□□□ 0.78
COL27A1-207ENST00000494090 RIOX1Q9H6W3 641 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 BLOC1S6Q9UL45 172 aa19.9■□□□□ 0.78
COL27A1-207ENST00000494090 ARIH2O95376 493 aa19.89■□□□□ 0.78
COL27A1-207ENST00000494090 SLC11A2P49281 568 aa19.89■□□□□ 0.78
COL27A1-207ENST00000494090 AASDHQ4L235 1098 aaPredicted RBP19.89■□□□□ 0.78
COL27A1-207ENST00000494090 TNIP2Q8NFZ5 429 aa19.89■□□□□ 0.78
COL27A1-207ENST00000494090 ZNF556Q9HAH1 456 aa19.89■□□□□ 0.78
COL27A1-207ENST00000494090 GID8Q9NWU2 228 aa19.89■□□□□ 0.78
COL27A1-207ENST00000494090 OGTO15294 1046 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 AKAP10O43572 662 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 PTGER2P43116 358 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 MROH9Q5TGP6 573 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 NOD2Q9HC29 1040 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 EGFRP00533 1210 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 ATICP31939 592 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 GCLCP48506 637 aaPredicted RBP19.89■□□□□ 0.77
COL27A1-207ENST00000494090 TRIP10Q15642 601 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 C10orf120Q5SQS8 335 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 TMEM154Q6P9G4 183 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 TFB1MQ8WVM0 346 aaKnown RBP19.89■□□□□ 0.77
COL27A1-207ENST00000494090 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.89■□□□□ 0.775e-8■■■■■ 57.9
COL27A1-207ENST00000494090 CCDC78A2IDD5 438 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 SUPT3HB4E1H0 165 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 SERPIND1P05546 499 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 ZNF720Q7Z2F6 126 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 CCNJLQ8IV13 435 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 RTFDC1Q9BY42 306 aaPredicted RBP19.89■□□□□ 0.77
COL27A1-207ENST00000494090 NCAM1P13591 858 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 TMEM62Q0P6H9 643 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 R3HDM1Q15032 1099 aaKnown RBP19.89■□□□□ 0.77
COL27A1-207ENST00000494090 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 GMCL1Q96IK5 515 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 ZNF518BQ9C0D4 1074 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 MROH8Q9H579 483 aa19.89■□□□□ 0.77
COL27A1-207ENST00000494090 DMGDHQ9UI17 866 aaKnown RBP19.89■□□□□ 0.77
COL27A1-207ENST00000494090 F9P00740 461 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 LRG1P02750 347 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 HSPA1AP0DMV8 641 aaKnown RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 HSPA1BP0DMV9 641 aaKnown RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 CYB5D1Q6P9G0 228 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SNX31Q8N9S9 440 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 GMCL1P1Q8NEA9 526 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 EHD4Q9H223 541 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ITGB3P05106 788 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 TFDP3Q5H9I0 405 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 IPMKQ8NFU5 416 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ATG4AQ8WYN0 398 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ADCY3O60266 1144 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 GEMP55040 296 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ZNF669Q96BR6 464 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 PAWRQ96IZ0 340 aaKnown RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SH3GL3Q99963 347 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 LRRIQ1Q96JM4 1722 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SPATA31A5Q5VU36 1347 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SPATA31A7Q8IWB4 1347 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 AKAP3O75969 853 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SEC24DO94855 1032 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 NAMPTP43490 491 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 MRPS35P82673 323 aaKnown RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 HIST2H2ACQ16777 129 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-207ENST00000494090 HIST2H2AA3Q6FI13 130 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 ARMC6Q6NXE6 501 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 CBWD1Q9BRT8 395 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 TMEM161AQ9NX61 479 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 SFMBT1Q9UHJ3 866 aa19.88■□□□□ 0.77
COL27A1-207ENST00000494090 HEATR9A2RTY3 570 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 ARHGEF9O43307 516 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 APOA1P02647 267 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 ALDH7A1P49419 539 aaKnown RBP19.87■□□□□ 0.77
COL27A1-207ENST00000494090 MTM1Q13496 603 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 LRRC6Q86X45 466 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 DPP3Q9NY33 737 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 KRT8P05787 483 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 VHLP40337 213 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 NPTX2P47972 431 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 SLC26A2P50443 739 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 PCSK7Q16549 785 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 ARID3BQ8IVW6 561 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-207ENST00000494090 ACSF2Q96CM8 615 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-207ENST00000494090 TMEM169Q96HH4 297 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 CINPQ9BW66 212 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-207ENST00000494090 ARP10275 920 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 IRF1P10914 325 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 DPEP1P16444 411 aa19.87■□□□□ 0.77
COL27A1-207ENST00000494090 TBX2Q13207 712 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms