RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 KIAA0907Q7Z7F0 614 aaPredicted RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 HOMER1Q86YM7 354 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 EFHBQ8N7U6 833 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 ATXN2LQ8WWM7 1075 aaKnown RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 NEU4Q8WWR8 484 aaPredicted RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 IRGQQ8WZA9 623 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 ANP32BQ92688 251 aaKnown RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 PMM1Q92871 262 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF622Q969S3 477 aaKnown RBP eCLIP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 SYAP1Q96A49 352 aaPredicted RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 TLCD1Q96CP7 247 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 CLIP3Q96DZ5 547 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 CDK19Q9BWU1 502 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 IKZF4Q9H2S9 585 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 ANKFY1Q9P2R3 1169 aa2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 COL2A1P02458 1487 aaPredicted RBP2.84□□□□□ -1.95
CDC42EP3-205ENST00000494083 GOLGA8BA8MQT2 603 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 GSG1L2A8MUP6 293 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 LPLP06858 475 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 NR4A1P22736 598 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 JAKMIP3Q5VZ66 844 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 KDM7AQ6ZMT4 941 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 IQCKQ8N0W5 287 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 IL17REQ8NFR9 667 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 FAM71BQ8TC56 605 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 KCNG4Q8TDN1 519 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF512Q96ME7 567 aaPredicted RBP2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANKRD27Q96NW4 1050 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 TMEM109Q9BVC6 243 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 NAA15Q9BXJ9 866 aaKnown RBP2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 ADAM21Q9UKJ8 722 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 TMPRSS11EQ9UL52 423 aa2.84□□□□□ -1.96
CDC42EP3-205ENST00000494083 DENND4AQ7Z401 1863 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 A0A0A6YYJ9 748 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PRSS38A1L453 326 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 KLRG2A4D1S0 409 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 EXOC5O00471 708 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CYR61O00622 381 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ADCY6O43306 1168 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SUV39H1O43463 412 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 KDM1AO60341 852 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TPM1P09493 284 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 KIR2DL3P43628 341 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 KPNA1P52294 538 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GYS2P54840 703 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLC8A3P57103 927 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 IL2P60568 153 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 HHEXQ03014 270 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 STX1AQ16623 288 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SGSM1Q2NKQ1 1148 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 LONRF3Q496Y0 759 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 BROXQ5VW32 411 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 WDR59Q6PJI9 974 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FAM111BQ6SJ93 734 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 Q6ZPA2 131 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ATG9AQ7Z3C6 839 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TRIML1Q8N9V2 468 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC112Q8NEF3 446 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GFM2Q969S9 779 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 WDR24Q96S15 920 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GPR87Q9BY21 358 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 VCPKMTQ9H867 229 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MRPL44Q9H9J2 332 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SPC25Q9HBM1 224 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 VTA1Q9NP79 307 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 DDX43Q9NXZ2 648 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 GPRC5BQ9NZH0 403 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TTC7AQ9ULT0 858 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 RRP15Q9Y3B9 282 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PCDHB6Q9Y5E3 794 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FLT1P17948 1338 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PPIP5K2O43314 1243 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 EDIL3O43854 480 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PPFIA4O75335 1185 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 H2AFYO75367 372 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CIAO1O76071 339 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 LY86O95711 162 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PFKMP08237 780 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PDGFRBP09619 1106 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 POU3F2P20265 443 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CMA1P23946 247 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 HOXA7P31268 230 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FLT3P36888 993 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TOB1P50616 345 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 PLS1Q14651 629 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ALX1Q15699 326 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZKSCAN8Q15776 578 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MTHFSDQ2M296 383 aaKnown RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANO6Q4KMQ2 910 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 TTMPQ5BVD1 217 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCDC62Q6P9F0 684 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SHC4Q6S5L8 630 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 MMS22LQ6ZRQ5 1243 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 APBB1IPQ7Z5R6 666 aaPredicted RBP2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 STRA8Q7Z7C7 330 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 LUZP1Q86V48 1076 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 FMNL3Q8IVF7 1028 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 DPF2Q92785 391 aa2.83□□□□□ -1.96
CDC42EP3-205ENST00000494083 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms