RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 KRT82Q9NSB4 513 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 ADAM22Q9P0K1 906 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 LZTS1Q9Y250 596 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 YBX2Q9Y2T7 364 aaKnown RBP12.06□□□□□ -0.48
MCF2L-231ENST00000494043 NCANO14594 1321 aa12.06□□□□□ -0.48
MCF2L-231ENST00000494043 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 TULP2O00295 520 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 C2CD2LO14523 706 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 XPO1O14980 1071 aaKnown RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 KRT86O43790 486 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 AP1G2O75843 785 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CALB1P05937 261 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 RB1P06400 928 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 MYBL1P10243 752 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CTSAP10619 480 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CPB1P15086 417 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 PBX2P40425 430 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 PLA2G4AP47712 749 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CDR1P51861 262 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 SLC8A3P57103 927 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CREMQ03060 361 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 SMARCB1Q12824 385 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 GPR17Q13304 367 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 RAB30Q15771 203 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 ARHGAP29Q52LW3 1261 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 LIN9Q5TKA1 542 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CLEC20AQ6ZU45 233 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 SPRED2Q7Z698 418 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 ERICH1Q86X53 443 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 STK32AQ8WU08 396 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 ZNF653Q96CK0 615 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 FUBP3Q96I24 572 aaKnown RBP eCLIP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 SAMD11Q96NU1 681 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 TGS1Q96RS0 853 aaKnown RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 C11orf70Q9BRQ4 267 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 C11orf84Q9BUA3 381 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 PBX4Q9BYU1 374 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 RHOBTB2Q9BYZ6 727 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 LZTFL1Q9NQ48 299 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CYLDQ9NQC7 956 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 MRPL17Q9NRX2 175 aaKnown RBP12.05□□□□□ -0.48
MCF2L-231ENST00000494043 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CDY1Q9Y6F8 540 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 CHD7Q9P2D1 2997 aa12.05□□□□□ -0.48
MCF2L-231ENST00000494043 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 GBF1Q92538 1859 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 A0A0A6YYK5 440 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 MTMR11A4FU01 709 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ADAM12O43184 909 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 LILRB3O75022 631 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ABL1P00519 1130 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ERBB2P04626 1255 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 CYP1A2P05177 515 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 RPL17P18621 184 aaKnown RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 BDNFP23560 247 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 DNAJB2P25686 324 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 MAGEA11P43364 429 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 GABRB2P47870 512 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 RPL34P49207 117 aaKnown RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 RGS7P49802 495 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 CACNA2D1P54289 1103 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ARPP19P56211 112 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 MAP3K7CLP57077 242 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ERVK-21P61565 698 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 GPC5P78333 572 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ROR1Q01973 937 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 TAP1Q03518 808 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 UBE3AQ05086 875 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 CFAP221Q4G0U5 840 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 C2CD6Q53TS8 623 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 PMF1Q6P1K2 205 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 TDHQ8IZJ6 230 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 IPO4Q8TEX9 1081 aaKnown RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 C2orf15Q8WU43 125 aaKnown RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 AUTS2Q8WXX7 1259 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 RFFLQ8WZ73 363 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ARHGEF26Q96DR7 871 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 HSFY1Q96LI6 401 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 SMOQ99835 787 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 CLSTN3Q9BQT9 956 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 MIS12Q9H081 205 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 SYNCQ9H7C4 482 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 RXFP1Q9HBX9 757 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 AVENQ9NQS1 362 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ST7Q9NRC1 585 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 TMEM30AQ9NV96 361 aa12.04□□□□□ -0.48
MCF2L-231ENST00000494043 ABI2Q9NYB9 513 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms