RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DUSP16Q9BY84 665 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 LHX5Q9H2C1 402 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 TTYH1Q9H313 450 aaPredicted RBP15.79■□□□□ 0.12
ACTB-213ENST00000493945 SYNCQ9H7C4 482 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 CYLDQ9NQC7 956 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 ASB3Q9Y575 518 aa15.79■□□□□ 0.12
ACTB-213ENST00000493945 EPOPA6NHQ4 379 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 SOX1O00570 391 aaPredicted RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 TGM5O43548 720 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 AKR1B10O60218 316 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 ATP2C2O75185 946 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 MICAL2O94851 1124 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 HNRNPA1P09651 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
ACTB-213ENST00000493945 PNMA6AP0CW24 399 aaPredicted RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 HAPLN1P10915 354 aaPredicted RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 BDNFP23560 247 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 NSFP46459 744 aaKnown RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 CAMK1Q14012 370 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 GRIN2CQ14957 1233 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 TMTC1Q8IUR5 882 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 SCN4BQ8IWT1 228 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 FUKQ8N0W3 1084 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 C12orf29Q8N999 325 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 TRIM11Q96F44 468 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 TMEM209Q96SK2 561 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.78■□□□□ 0.12
ACTB-213ENST00000493945 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 UBXN6Q9BZV1 441 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 HAUS4Q9H6D7 363 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 LRRC4Q9HBW1 653 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 ZDHHC7Q9NXF8 308 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
ACTB-213ENST00000493945 INSL5Q9Y5Q6 135 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 ATG2AQ2TAZ0 1938 aa15.78■□□□□ 0.12
ACTB-213ENST00000493945 RNF225M0QZC1 329 aaPredicted RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 XPO1O14980 1071 aaKnown RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 SART1O43290 800 aaKnown RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 HCRTO43612 131 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 RTN3O95197 1032 aaPredicted RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 FGF19O95750 216 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 C8AP07357 584 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 CSH1P0DML2 217 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 CSH2P0DML3 217 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 DUSP4Q13115 394 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 TAF3Q5VWG9 929 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 RSPO2Q6UXX9 243 aaPredicted RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 RBM23Q86U06 439 aaKnown RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 NOP9Q86U38 636 aaKnown RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 LRRTM3Q86VH5 581 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 CCDC170Q8IYT3 715 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 EFHBQ8N7U6 833 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 TC2NQ8N9U0 490 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 ATAD1Q8NBU5 361 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 SLC7A14Q8TBB6 771 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 STK32AQ8WU08 396 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 HSFY1Q96LI6 401 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 C8orf48Q96LL4 319 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 GCNAQ96QF7 691 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 BAG1Q99933 345 aaPredicted RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 TRIM62Q9BVG3 475 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 FBXO44Q9H4M3 255 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 SFXN1Q9H9B4 322 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 MAN1C1Q9NR34 630 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 COMMD8Q9NX08 183 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 NOCTQ9UK39 431 aaKnown RBP15.77■□□□□ 0.12
ACTB-213ENST00000493945 STRIP2Q9ULQ0 834 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 YIPF1Q9Y548 306 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 HCFC2Q9Y5Z7 792 aa15.77■□□□□ 0.12
ACTB-213ENST00000493945 PLXNA3P51805 1871 aa15.77■□□□□ 0.11
ACTB-213ENST00000493945 PATJQ8NI35 1801 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 RFXAPO00287 272 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 ADAM12O43184 909 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 POU2F2P09086 479 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 FOSL2P15408 326 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 HOXB8P17481 243 aaPredicted RBP15.76■□□□□ 0.11
ACTB-213ENST00000493945 DESP17661 470 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 PLA2G4AP47712 749 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
ACTB-213ENST00000493945 SPA17Q15506 151 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 TCEAL5Q5H9L2 206 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 IRF2BP2Q7Z5L9 587 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 SIX6OS1Q8N1H7 587 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 DEFB123Q8N688 67 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 TFAP2BQ92481 460 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 FAM161BQ96MY7 647 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 CSNK1G1Q9HCP0 422 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 ST7Q9NRC1 585 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 NME7Q9Y5B8 376 aa15.76■□□□□ 0.11
ACTB-213ENST00000493945 LAMA2P24043 3122 aaKnown RBP15.75■□□□□ 0.11
ACTB-213ENST00000493945 MYO7AQ13402 2215 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 F8VP50 259 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 ZMYND10O75800 440 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 FBXO21O94952 628 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 CALB1P05937 261 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 MMEP08473 750 aa15.75■□□□□ 0.11
ACTB-213ENST00000493945 CYP2F1P24903 491 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms