RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CLCN1P35523 988 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 MAGEA11P43364 429 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 NTHL1P78549 312 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 MTMR3Q13615 1198 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 SGO2Q562F6 1265 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 GRASPQ7Z6J2 395 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 GPR149Q86SP6 731 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 FAM71AQ8IYT1 594 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 CMASQ8NFW8 434 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 SMARCD1Q96GM5 515 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 SMOQ99835 787 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 DNAI2Q9GZS0 605 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 HSFX1Q9UBD0 423 aa18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 USP15Q9Y4E8 981 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-208ENST00000493815 VDRP11473 427 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 EPHB3P54753 998 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 MAP3K7CLP57077 242 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 JAM2P57087 298 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 GOLGA7BQ2TAP0 167 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 CES5AQ6NT32 575 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 VSTM1Q6UX27 236 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 CACNA2D4Q7Z3S7 1137 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 SLC47A2Q86VL8 602 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 HS6ST3Q8IZP7 471 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 SPAG5Q96R06 1193 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 THEGQ9P2T0 379 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 DNMT3BQ9UBC3 853 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 TSPAN16Q9UKR8 245 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 ATP8B3O60423 1300 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 O00370 1275 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 XYLBO75191 536 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 GFPT2O94808 682 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 CFHP08603 1231 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 FAM200BP0CF97 657 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 GNA15P30679 374 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 KCNQ1P51787 676 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 ITIH3Q06033 890 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 LEXMQ3ZCV2 418 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 ARHGAP17Q68EM7 881 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 DNAJB7Q7Z6W7 309 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 ZMIZ2Q8NF64 920 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 UBA3Q8TBC4 463 aa18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 MAGED2Q9UNF1 606 aaPredicted RBP18.95■□□□□ 0.62
PDLIM7-208ENST00000493815 THAP12O43422 761 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 CBFA2T2O43439 604 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 MBTPS2O43462 519 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 TPM3P06753 285 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 RPL10AP62906 217 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 ARID5AQ03989 594 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 SARM1Q6SZW1 724 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 CLEC20AQ6ZU45 233 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 RTL10Q7L3V2 364 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 ELMOD1Q8N336 334 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 ZNF512Q96ME7 567 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 KIAA1257Q9ULG3 409 aa18.94■□□□□ 0.62
PDLIM7-208ENST00000493815 TULP2O00295 520 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 NRG2O14511 850 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 TRIM66O15016 1216 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 ANXA13P27216 316 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 IFRD2Q12894 506 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 PLD1Q13393 1074 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 SMAD4Q13485 552 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 VEPH1Q14D04 833 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 ATAT1Q5SQI0 421 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 PTCRAQ6ISU1 281 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 ZNF606Q8WXB4 792 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 BAP1Q92560 729 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 DUSP16Q9BY84 665 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 TTYH3Q9C0H2 523 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 POMKQ9H5K3 350 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 ZNF334Q9HCZ1 680 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 DMAP1Q9NPF5 467 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 VCANP13611 3396 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 PTPRDP23468 1912 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 DOCK6Q96HP0 2047 aa18.93■□□□□ 0.62
PDLIM7-208ENST00000493815 FAM170AA1A519 330 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SLC38A8A6NNN8 435 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 M0QYV0 167 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 MICAL2O94851 1124 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PAPLNO95428 1278 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 RHOP08100 348 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 NPR3P17342 541 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SOX5P35711 763 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 USP46P62068 366 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PTK2Q05397 1052 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 LCLAT1Q6UWP7 414 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 GPRIN1Q7Z2K8 1008 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 ANKRD52Q8NB46 1076 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 SUSD6Q92537 303 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 C8orf48Q96LL4 319 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 CSNK1G1Q9HCP0 422 aa18.92■□□□□ 0.62
PDLIM7-208ENST00000493815 MYL4P12829 197 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms