RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 STK4Q13043 487 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 KMT5BQ4FZB7 885 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 CFAP221Q4G0U5 840 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 C4orf50Q6ZRC1 276 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 OR6B3Q8NGW1 331 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 PLEKHO2Q8TD55 490 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 TRMT2BQ96GJ1 504 aaKnown RBP15.66■□□□□ 0.1
ATG4B-223ENST00000493618 DPEP3Q9H4B8 488 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 EXOC1Q9NV70 894 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 UXTQ9UBK9 157 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-223ENST00000493618 NXF1Q9UBU9 619 aaKnown RBP15.66■□□□□ 0.1
ATG4B-223ENST00000493618 SMG5Q9UPR3 1016 aaKnown RBP15.66■□□□□ 0.1
ATG4B-223ENST00000493618 RALGAPA1Q6GYQ0 2036 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 DCHS1Q96JQ0 3298 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 EML5Q05BV3 1969 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 C2orf78A6NCI8 922 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 OTOL1A6NHN0 477 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 PHACTR2O75167 634 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 SLFN14P0C7P3 912 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 GNL1P36915 607 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 MAGEA11P43364 429 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 CXCL12P48061 93 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 USP46P62068 366 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 SNRPFP62306 86 aaKnown RBP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 TNNC1P63316 161 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 TRPC3Q13507 836 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 RUNX3Q13761 415 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 LPAL2Q16609 132 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 WDR72Q3MJ13 1102 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 HEATR6Q6AI08 1181 aaKnown RBP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 ARL14EPQ8N8R7 260 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 PCED1BQ96HM7 432 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 FUBP3Q96I24 572 aaKnown RBP eCLIP15.65■□□□□ 0.1
ATG4B-223ENST00000493618 SPATA32Q96LK8 384 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 MYRFLQ96LU7 910 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 FAM83CQ9BQN1 747 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 IER2Q9BTL4 223 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 ZMYM5Q9UJ78 669 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 SPTBN4Q9H254 2564 aa15.65■□□□□ 0.1
ATG4B-223ENST00000493618 TRAV19A0A0A6YYK7 116 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 CHURC1-FNTBB4DL54 471 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 CKMP06732 381 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 RAP1GAPP47736 663 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 FNTBP49356 437 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 CACNA2D1P54289 1103 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 BIRC3Q13489 604 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 PPP2R5DQ14738 602 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 DGKKQ5KSL6 1271 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 CC2D1AQ6P1N0 951 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-223ENST00000493618 C1orf228Q6PIY5 440 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 C12orf56Q8IXR9 622 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 SPEM1Q8N4L4 309 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 MYCBPAPQ8TBZ2 947 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 CHFRQ96EP1 664 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 SMYD3Q9H7B4 428 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 GTF3C3Q9Y5Q9 886 aa15.64■□□□□ 0.09
ATG4B-223ENST00000493618 LRRIQ3A6PVS8 624 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 CLDN5O00501 218 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 TACC1O75410 805 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 USP17L7P0C7H9 530 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 PTPN1P18031 435 aaKnown RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 ANXA13P27216 316 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 NRLP54845 237 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 CDH8P55286 799 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 IFRD2Q12894 506 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 SRSF5Q13243 272 aaKnown RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 CCINQ13939 588 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 ZNF268Q14587 947 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 MTF1Q14872 753 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 TDRD10Q5VZ19 366 aaKnown RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 NAIF1Q69YI7 327 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 FSTL4Q6MZW2 842 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 PKN3Q6P5Z2 889 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 SCARA5Q6ZMJ2 495 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 MAMSTRQ6ZN01 415 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 RMDN1Q96DB5 314 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 SPATA17Q96L03 361 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 FAM126AQ9BYI3 521 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 XYLT2Q9H1B5 865 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 GCNT4Q9P109 453 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 CGNQ9P2M7 1197 aaKnown RBP15.63■□□□□ 0.09
ATG4B-223ENST00000493618 WNT6Q9Y6F9 365 aa15.63■□□□□ 0.09
ATG4B-223ENST00000493618 SOBPA7XYQ1 873 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 A8MXQ7 604 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 F8VP50 259 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 K7ESF4 209 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 CMA1P23946 247 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 DLG4P78352 724 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 FAM160A1Q05DH4 1040 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 USP4Q13107 963 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 MAPRE1Q15691 268 aaKnown RBP15.62■□□□□ 0.09
ATG4B-223ENST00000493618 ZNF77Q15935 545 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 ZNF699Q32M78 642 aa15.62■□□□□ 0.09
ATG4B-223ENST00000493618 VSTM1Q6UX27 236 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms