RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 HPDLQ96IR7 371 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 SLC22A12Q96S37 553 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 P2RY13Q9BPV8 354 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 ZSCAN16Q9H4T2 348 aaPredicted RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 FBRSL1Q9HCM7 1045 aaKnown RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 INTS13Q9NVM9 706 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 MORC2Q9Y6X9 1032 aaPredicted RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 C2orf78A6NCI8 922 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 AXIN1O15169 862 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ATP2C2O75185 946 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 LMO2P25791 158 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 MAGEA11P43364 429 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 IFNAR2P48551 515 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 GALK1P51570 392 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 PSMC1P62191 440 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 USP4Q13107 963 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 KCNB1Q14721 858 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 SURF1Q15526 300 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ZNF77Q15935 545 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 DUOXA2Q1HG44 320 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 PPM1JQ5JR12 505 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 NAIF1Q69YI7 327 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 FAM171BQ6P995 826 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CBWD2Q8IUF1 395 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CAMKK1Q8N5S9 505 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ARL14EPQ8N8R7 260 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 RPLP0P6Q8NHW5 317 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 KBTBD7Q8WVZ9 684 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CNTNAP3BQ96NU0 1288 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 MMS19Q96T76 1030 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 SYT15Q9BQS2 421 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CNTNAP3Q9BZ76 1288 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 LRRC27Q9C0I9 530 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ARRDC1-AS1Q9H2J1 176 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 TNMDQ9H2S6 317 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 ECT2Q9H8V3 914 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 HSPBP1Q9NZL4 362 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 MAGEC2Q9UBF1 373 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 CDH9Q9ULB4 789 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 WNT6Q9Y6F9 365 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 SDK1Q7Z5N4 2213 aa10.99□□□□□ -0.65
NUDCD3-210ENST00000493613 K7ELQ4 463 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 SPTLC2O15270 562 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 EIF3DO15371 548 aaKnown RBP eCLIP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 ADRB1P08588 477 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 HDCP19113 662 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 BDNFP23560 247 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 HOXD13P35453 343 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 GRIK1P39086 918 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 RAP1GAPP47736 663 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 SF3A2Q15428 464 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 MAPRE1Q15691 268 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 CCDC6Q16204 474 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 EML3Q32P44 896 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 FBXO43Q4G163 708 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 AASDHQ4L235 1098 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 LIMS2Q7Z4I7 341 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 KBTBD6Q86V97 674 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 WDR49Q8IV35 697 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 SH3RF2Q8TEC5 729 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 CD101Q93033 1021 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 MYLPFQ96A32 169 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 LOXL4Q96JB6 756 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 SPATA17Q96L03 361 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 HHIPQ96QV1 700 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 TRIM9Q9C026 710 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 KIAA1586Q9HCI6 787 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 CRTAC1Q9NQ79 661 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 POLR3BQ9NW08 1133 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 GCNT4Q9P109 453 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 CHD8Q9HCK8 2581 aa10.98□□□□□ -0.65
NUDCD3-210ENST00000493613 AKAP3O75969 853 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 EPN2O95208 641 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 PDGFRBP09619 1106 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 ZNF806P0C7X5 589 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 TNNI1P19237 187 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 WARSP23381 471 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 ANXA13P27216 316 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 PDE6CP51160 858 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 ASIC1P78348 528 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 AMPD3Q01432 767 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 NR1H3Q13133 447 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 PSMD2Q13200 908 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 E2F4Q16254 413 aa10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 SNRNP35Q16560 246 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 FOXD4L5Q5VV16 416 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-210ENST00000493613 DENND5BQ6ZUT9 1274 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms