RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PMS2CLQ68D20 193 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 SPATA2LQ8IUW3 424 aaPredicted RBP23.02■■□□□ 1.28
PFDN4-205ENST00000493356 SCN4BQ8IWT1 228 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 PIAS4Q8N2W9 510 aaPredicted RBP23.02■■□□□ 1.28
PFDN4-205ENST00000493356 FSIP1Q8NA03 581 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 SPATA18Q8TC71 538 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 USP33Q8TEY7 942 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 CACTINQ8WUQ7 758 aaKnown RBP23.02■■□□□ 1.28
PFDN4-205ENST00000493356 SAAL1Q96ER3 474 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 FUBP3Q96I24 572 aaKnown RBP eCLIP23.02■■□□□ 1.28
PFDN4-205ENST00000493356 FAM84AQ96KN4 292 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 TPSD1Q9BZJ3 242 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 LINC00597Q9H2U6 94 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 SNX9Q9Y5X1 595 aa23.02■■□□□ 1.28
PFDN4-205ENST00000493356 TCF3P15923 654 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 KCNB1Q14721 858 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 USP39Q53GS9 565 aaKnown RBP23.01■■□□□ 1.27
PFDN4-205ENST00000493356 C11orf74Q86VG3 221 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 CSGALNACT2Q8N6G5 542 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 CCDC26Q8TAB7 109 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 MRPL44Q9H9J2 332 aaKnown RBP23.01■■□□□ 1.27
PFDN4-205ENST00000493356 RBAKQ9NYW8 714 aaPredicted RBP23.01■■□□□ 1.27
PFDN4-205ENST00000493356 SEL1LQ9UBV2 794 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 ITGA11Q9UKX5 1188 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 ARHGAP26Q9UNA1 814 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 EXOC7Q9UPT5 735 aa23.01■■□□□ 1.27
PFDN4-205ENST00000493356 PTPRDP23468 1912 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 C1QTNF9BB2RNN3 333 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 GABRDO14764 452 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 C1QTNF9P0C862 333 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 HDCP19113 662 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 PCSK1P29120 753 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 OPRD1P41143 372 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 LHX1P48742 406 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 ZNF252P-AS1Q0IIN9 211 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 RABEP1Q15276 862 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 L1TD1Q5T7N2 865 aaKnown RBP23■■□□□ 1.27
PFDN4-205ENST00000493356 USP49Q70CQ1 688 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 RASSF3Q86WH2 238 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 ADGRF2Q8IZF7 708 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 TOP6BLQ8N6T0 577 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 EPSTI1Q96J88 318 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 ACCSQ96QU6 501 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 SIX4Q9UIU6 781 aa23■■□□□ 1.27
PFDN4-205ENST00000493356 ANTXRLA6NF34 631 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 K7EQS6 105 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 KHNYNO15037 678 aaKnown RBP22.99■■□□□ 1.27
PFDN4-205ENST00000493356 NFATC1O95644 943 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 KRT19P08727 400 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 BCKDHBP21953 392 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 MAGEA11P43364 429 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 SEC13P55735 322 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 ZXDBP98169 803 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 SF3A1Q15459 793 aaKnown RBP22.99■■□□□ 1.27
PFDN4-205ENST00000493356 SOWAHAQ2M3V2 549 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 C2orf27AQ580R0 203 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 SH3PXD2AQ5TCZ1 1133 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 ANO7Q6IWH7 933 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 FAM171BQ6P995 826 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 UNQ6494/PRO21346Q6UXR6 183 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 CNOT6LQ96LI5 555 aaKnown RBP22.99■■□□□ 1.27
PFDN4-205ENST00000493356 TMEM9BQ9NQ34 198 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 TBC1D7Q9P0N9 293 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 WASF3Q9UPY6 502 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 ASPMQ8IZT6 3477 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 ZFYVE26Q68DK2 2539 aa22.99■■□□□ 1.27
PFDN4-205ENST00000493356 AKAP13Q12802 2813 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 PATE3B3GLJ2 98 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 ATP2C2O75185 946 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 LDHAP00338 332 aaKnown RBP22.98■■□□□ 1.27
PFDN4-205ENST00000493356 GARTP22102 1010 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 RBP5P82980 135 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 FOXC1Q12948 553 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 GAB4Q2WGN9 574 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 CYP2U1Q7Z449 544 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 MDGA1Q8NFP4 955 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 DNAJC19Q96DA6 116 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 MTMR12Q9C0I1 747 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 STK17AQ9UEE5 414 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 MMP17Q9ULZ9 603 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 SPEGQ15772 3267 aa22.98■■□□□ 1.27
PFDN4-205ENST00000493356 ATRXP46100 2492 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 GOLGA8IPA6NC78 632 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 MYMKA6NI61 221 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 GOLGA8JA6NMD2 632 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 CDX4O14627 284 aaPredicted RBP22.97■■□□□ 1.27
PFDN4-205ENST00000493356 GCNT3O95395 438 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
PFDN4-205ENST00000493356 GAP43P17677 238 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 PDE6CP51160 858 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 CASP5P51878 434 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 C4orf50Q6ZRC1 276 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 BRAPQ7Z569 592 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 SPATA17Q96L03 361 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 CBWD1Q9BRT8 395 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 PDE11AQ9HCR9 933 aa22.97■■□□□ 1.27
PFDN4-205ENST00000493356 ASCC3Q8N3C0 2202 aaKnown RBP22.96■■□□□ 1.27
PFDN4-205ENST00000493356 CEACAM1P13688 526 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 CSRP1P21291 193 aaKnown RBP22.96■■□□□ 1.27
PFDN4-205ENST00000493356 PSMC1P62191 440 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms