RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 TMC3Q7Z5M5 1100 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 SLC13A5Q86YT5 568 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCDC50Q8IVM0 306 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MCOLN2Q8IZK6 566 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 ATP6V1G3Q96LB4 118 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 RPS6KC1Q96S38 1066 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 COL25A1Q9BXS0 654 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 OSBPL6Q9BZF3 934 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 INO80BQ9C086 356 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 MTMR12Q9C0I1 747 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CAPN7Q9Y6W3 813 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 EBAG9O00559 213 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 PHF2O75151 1096 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 GJB5O95377 273 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CKBP12277 381 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TCF3P15923 654 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 HADHBP55084 474 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 ZNF844Q08AG5 666 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MFSD10Q14728 455 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 XKR4Q5GH76 650 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 UBAP2Q5T6F2 1119 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 SLFN12LQ6IEE8 588 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 LRRC8DQ7L1W4 858 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 ZNF598Q86UK7 904 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 PDGFCQ9NRA1 345 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 DNAJC17Q9NVM6 304 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 KLHL11Q9NVR0 708 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 ADAM22Q9P0K1 906 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 UVRAGQ9P2Y5 699 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TDRD15B5MCY1 1934 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 MUC22E2RYF6 1773 aaPredicted RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 ZBTB42B2RXF5 422 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 KIAA0391O15091 583 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 LILRB3O75022 631 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 WEE2P0C1S8 567 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 AXLP30530 894 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 HOXA9P31269 272 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 RPL21P46778 160 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 CLCN3P51790 818 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 MYL6P60660 151 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 ADCY2Q08462 1091 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 LAMTOR4Q0VGL1 99 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 PPP1R7Q15435 360 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 SMAD2Q15796 467 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 ZNF528Q3MIS6 628 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 DUPD1Q68J44 220 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CD101Q93033 1021 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 FAM167AQ96KS9 214 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 SPATA33Q96N06 139 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 HERPUD2Q9BSE4 406 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 IMPG2Q9BZV3 1241 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 KIF9Q9HAQ2 790 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CD248Q9HCU0 757 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 MTUS1Q9ULD2 1270 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 NOVA2Q9UNW9 492 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 PCDHA3Q9Y5H8 950 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 PTPRDP23468 1912 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 GRXCR2A6NFK2 248 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 B4GALT5O43286 388 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 HOXA2O43364 376 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 EOMESO95936 686 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 SHBGP04278 402 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CLTAP09496 248 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 UNGP13051 313 aaPredicted RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 DNAJB2P25686 324 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CHRNA3P32297 505 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 SEC24CP53992 1094 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CREMQ03060 361 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 SGO2Q562F6 1265 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 DEFB123Q8N688 67 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CABS1Q96KC9 395 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 CGRRF1Q99675 332 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 ZNF576Q9H609 170 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
HERC4-211ENST00000492996 RASAL2Q9UJF2 1139 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 FAM50BQ9Y247 325 aa7.41□□□□□ -1.22
HERC4-211ENST00000492996 LDHAP00338 332 aaKnown RBP7.4□□□□□ -1.22
HERC4-211ENST00000492996 CPP00450 1065 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 PRKCBP05771 671 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 KRT19P08727 400 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 TXNP10599 105 aaKnown RBP7.4□□□□□ -1.22
HERC4-211ENST00000492996 ACO1P21399 889 aaKnown RBP7.4□□□□□ -1.22
HERC4-211ENST00000492996 TMOD1P28289 359 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 PTGIRP43119 386 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 SLCO1A2P46721 670 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 ORC1Q13415 861 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 MAPK6Q16659 721 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 ATP13A4Q4VNC1 1196 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 ZNF410Q86VK4 478 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 DPF3Q92784 378 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 TMBIM4Q9HC24 238 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 PPANQ9NQ55 473 aaKnown RBP7.4□□□□□ -1.22
HERC4-211ENST00000492996 CHST7Q9NS84 486 aa7.4□□□□□ -1.22
HERC4-211ENST00000492996 INSL6Q9Y581 213 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms