RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 POLNQ7Z5Q5 900 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 ECHDC2Q86YB7 292 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 JAMLQ86YT9 394 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 ZDHHC17Q8IUH5 632 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 RCOR2Q8IZ40 523 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 TMEM86AQ8N2M4 240 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 EMC1Q8N766 993 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 ANKRD52Q8NB46 1076 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 B3GALNT2Q8NCR0 500 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 IFT81Q8WYA0 676 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 SENP8Q96LD8 212 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 TRIM51Q9BSJ1 452 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 OSBPL8Q9BZF1 889 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 VIPAS39Q9H9C1 493 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM114A2Q9NRY5 505 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 KLHL11Q9NVR0 708 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 PCYOX1Q9UHG3 505 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 NFU1Q9UMS0 254 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
SMARCC1-208ENST00000492896 SCN5AQ14524 2016 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 TULP2O00295 520 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 DNM1LO00429 736 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PIK3R2O00459 728 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 DPYSL4O14531 572 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 LRCH4O75427 683 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 RNF8O76064 485 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 KRT7P08729 469 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 RALAP11233 206 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 ODC1P11926 461 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 TCF4P15884 667 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 DESP17661 470 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PAX3P23760 479 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 LMO2P25791 158 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PTPN7P35236 360 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 COILP38432 576 aaPredicted RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PTGIRP43119 386 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 ACADSBP45954 432 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 LHX1P48742 406 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 COPS2P61201 443 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC25A11Q02978 314 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 WSCD1Q658N2 575 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 PMF1Q6P1K2 205 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 CCDC137Q6PK04 289 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 OLFML1Q6UWY5 402 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 LRRC8DQ7L1W4 858 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 TMEM110Q86TL2 294 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 ZDHHC14Q8IZN3 488 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SPATA18Q8TC71 538 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC2A14Q8TDB8 520 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 GRK7Q8WTQ7 553 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SEC14L1Q92503 715 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 UROC1Q96N76 676 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 SLITRK1Q96PX8 696 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 CNPY3Q9BT09 278 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 LRRC19Q9H756 370 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 RGS18Q9NS28 235 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 HOMER3Q9NSC5 361 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 ASNSD1Q9NWL6 643 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 CACNG4Q9UBN1 327 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 HPCAL4Q9UM19 191 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 INPP5FQ9Y2H2 1132 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 MYO16Q9Y6X6 1858 aa9.62□□□□□ -0.87
SMARCC1-208ENST00000492896 MICAL3Q7RTP6 2002 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ARHGEF37A1IGU5 675 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 LRRD1A4D1F6 860 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 C2CD4BA6NLJ0 364 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 GABRDO14764 452 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 XPO1O14980 1071 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 INPPL1O15357 1258 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 DAPK3O43293 454 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ECEL1O95672 775 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 POMCP01189 267 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SELPP16109 830 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 PTPN1P18031 435 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ACAT1P24752 427 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 GBP1P32455 592 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SCNN1AP37088 669 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 AARSP49588 968 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ZNF143P52747 638 aaPredicted RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC8A3P57103 927 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC6A3Q01959 620 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 KLF1Q13351 362 aaPredicted RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 TUSC3Q13454 348 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 BFSP2Q13515 415 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms