RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 H0YJX3 145 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 SIN3BO75182 1162 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 KDSRQ06136 332 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 TRIM28Q13263 835 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 Q3C1V9 767 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 ZNF394Q53GI3 561 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 RARS2Q5T160 578 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 SPTY2D1Q68D10 685 aaPredicted RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 PAOXQ6QHF9 649 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 TOM1L2Q6ZVM7 507 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 KCNK18Q7Z418 384 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 ZNF804AQ7Z570 1209 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 AMIGO2Q86SJ2 522 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 PRPF39Q86UA1 669 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 CNBD2Q96M20 576 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 CCDC138Q96M89 665 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 BRIP1Q9BX63 1249 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 RAB34Q9BZG1 259 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 PAIP1Q9H074 479 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 ARMC7Q9H6L4 198 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 LIN28AQ9H9Z2 209 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 CHST7Q9NS84 486 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 CACNA1SQ13698 1873 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 FAM237BA0A1B0GVD1 139 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 TTC34A8MYJ7 566 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 KMOO15229 486 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 TIMM44O43615 452 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 SPOPO43791 374 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 FAM189A1O60320 539 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 SLC5A1P13866 664 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 ACAP1Q15027 740 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 MOGQ16653 247 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 RGS21Q2M5E4 152 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 GJB7Q6PEY0 223 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 IYDQ6PHW0 289 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 FASTKD5Q7L8L6 764 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 ITIH5Q86UX2 942 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 POU5F2Q8N7G0 328 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 TRUB1Q8WWH5 349 aaKnown RBP10.12□□□□□ -0.79
VPS8-225ENST00000492449 ISOC1Q96CN7 298 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 CDH22Q9UJ99 828 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 ITGA11Q9UKX5 1188 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 POMPQ9Y244 141 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 IFT52Q9Y366 437 aa10.12□□□□□ -0.79
VPS8-225ENST00000492449 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CICQ96RK0 1608 aaPredicted RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 TRPM3Q9HCF6 1732 aaPredicted RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 C2orf71A6NGG8 1288 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 F5H6K3 240 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 SLC26A4O43511 780 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 KLRC2P26717 231 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CIITAP33076 1130 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 ERFP50548 548 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 ATP6V0D1P61421 351 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 TXNL4AP83876 142 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 TRIM71Q2Q1W2 868 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 CYP4F22Q6NT55 531 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CHERPQ8IWX8 916 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 ATP6V0D2Q8N8Y2 350 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 ADAMTS16Q8TE57 1224 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 USP6NLQ92738 828 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CCDC127Q96BQ5 260 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 EHD1Q9H4M9 534 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 SLC17A7Q9P2U7 560 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 EPS15L1Q9UBC2 864 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 PPARGC1AQ9UBK2 798 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 TAF1LQ8IZX4 1826 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 SCN7AQ01118 1682 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 RBBP6Q7Z6E9 1792 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 RGPD5Q99666 1765 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 TNS3Q68CZ2 1445 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 WDR91A4D1P6 747 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 RGS13O14921 159 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CLDN3O15551 220 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 KCNA6P17658 529 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 RFX1P22670 979 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 SERPINB6P35237 376 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 MXI1P50539 228 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 DMPKQ09013 629 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 GK3PQ14409 553 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 EEPD1Q7L9B9 569 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 MIER3Q7Z3K6 550 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 CCDC33Q8N5R6 958 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 TRIML2Q8N7C3 387 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 ZNF420Q8TAQ5 688 aaPredicted RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 SHKBP1Q8TBC3 707 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 TMIGD2Q96BF3 282 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 NAP1L4Q99733 375 aaKnown RBP10.11□□□□□ -0.79
VPS8-225ENST00000492449 RETREG1Q9H6L5 497 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 SAYSD1Q9NPB0 183 aa10.11□□□□□ -0.79
VPS8-225ENST00000492449 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms