RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 GSDMAQ96QA5 445 aa28.92■■■□□ 2.22
SH3GL3-204ENST00000492099 THG1LQ9NWX6 298 aaKnown RBP28.92■■■□□ 2.22
SH3GL3-204ENST00000492099 HOOK1Q9UJC3 728 aaKnown RBP28.92■■■□□ 2.22
SH3GL3-204ENST00000492099 SHISA7A6NL88 538 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 TRIM66O15016 1216 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 KRT13P13646 458 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 PSMC2P35998 433 aaKnown RBP28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 EDRF1Q3B7T1 1238 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 TXNDC8Q6A555 127 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 C1orf228Q6PIY5 440 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 FAM186BQ8IYM0 893 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 B3GALNT2Q8NCR0 500 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 FAM3CQ92520 227 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 TIGD1Q96MW7 591 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 SMYD3Q9H7B4 428 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 EHD2Q9NZN4 543 aa28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 NUP210Q8TEM1 1887 aaPredicted RBP28.91■■■□□ 2.22
SH3GL3-204ENST00000492099 COL4A3Q01955 1670 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 SMC2O95347 1197 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 RPS9P46781 194 aaKnown RBP28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 ZCWPW2Q504Y3 356 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 GTPBP4Q9BZE4 634 aaKnown RBP28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 DPEP3Q9H4B8 488 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 C8orf33Q9H7E9 229 aaPredicted RBP28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 KIF9Q9HAQ2 790 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 TDP1Q9NUW8 608 aa28.9■■■□□ 2.22
SH3GL3-204ENST00000492099 TADA3O75528 432 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 CDH8P55286 799 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 C1orf220Q5T0J3 134 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 TNIP3Q96KP6 325 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 C8orf48Q96LL4 319 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 ELOVL4Q9GZR5 314 aa28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 SMG9Q9H0W8 520 aaKnown RBP28.89■■■□□ 2.22
SH3GL3-204ENST00000492099 KPNA1P52294 538 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 COBLL1Q53SF7 1204 aa28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 ZNF658Q5TYW1 1059 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 DENND5BQ6ZUT9 1274 aa28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 SMYD4Q8IYR2 804 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 USP13Q92995 863 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 SPATA6Q9NWH7 488 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 NDRG2Q9UN36 371 aaKnown RBP28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 MIA3Q5JRA6 1907 aa28.88■■■□□ 2.21
SH3GL3-204ENST00000492099 ASS1P00966 412 aaKnown RBP28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 PIK3CAP42336 1068 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 FZD5Q13467 585 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 ZNF268Q14587 947 aaPredicted RBP28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 SCARA5Q6ZMJ2 495 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 SPATA20Q8TB22 786 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 SMARCE1Q969G3 411 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 ZFYVE19Q96K21 471 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 F5P12259 2224 aa28.87■■■□□ 2.21
SH3GL3-204ENST00000492099 COL4A2P08572 1712 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 F8VP50 259 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 LAMTOR5O43504 91 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 HLA-DRAP01903 254 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 CCNE1P24864 410 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 RAP1GAPP47736 663 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 NOP14P78316 857 aaKnown RBP28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 FRMD5Q7Z6J6 570 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 ELOA2Q8IYF1 753 aaPredicted RBP28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 ZNF687Q8N1G0 1237 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 B3GNT5Q9BYG0 378 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 IMPG2Q9BZV3 1241 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 TRPC7Q9HCX4 862 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 CCL26Q9Y258 94 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 PCDHA5Q9Y5H7 936 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 ATP8B3O60423 1300 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 TICRRQ7Z2Z1 1910 aa28.86■■■□□ 2.21
SH3GL3-204ENST00000492099 TRAV19A0A0A6YYK7 116 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 CETN3O15182 167 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 GFRA3O60609 400 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 USP17L7P0C7H9 530 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 TRIM49P0CI25 452 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 TRIM49CP0CI26 452 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 PRCPP42785 496 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 PPP3CCP48454 512 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 GCLMP48507 274 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 MCCD1P59942 119 aaPredicted RBP28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 RALGPS2Q86X27 583 aaPredicted RBP28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 ELMO3Q96BJ8 720 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 TTLL2Q9BWV7 592 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 ZNF518BQ9C0D4 1074 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 SDCBP2Q9H190 292 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 GTSE1Q9NYZ3 720 aa28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 CIZ1Q9ULV3 898 aaPredicted RBP28.85■■■□□ 2.21
SH3GL3-204ENST00000492099 DENND4CQ5VZ89 1909 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 SP9P0CG40 484 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 GTF2H1P32780 548 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 PDE6CP51160 858 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 PPP3CAQ08209 521 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 UNC93AQ86WB7 457 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 NKD2Q969F2 451 aaPredicted RBP28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 TSG101Q99816 390 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 IER2Q9BTL4 223 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 TMEM8AQ9HCN3 771 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 GKN1Q9NS71 199 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 TRPM5Q9NZQ8 1165 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 FBXO4Q9UKT5 387 aa28.84■■■□□ 2.21
SH3GL3-204ENST00000492099 SPECC1L-ADORA2AF8WAN1 911 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 CLDN5O00501 218 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms