RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ARL14EPQ8N8R7 260 aaPredicted RBP14.23□□□□□ -0.13
USF1-206ENST00000491629 TTC16Q8NEE8 873 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 DEFB124Q8NES8 71 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 TSTD1Q8NFU3 115 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 OLIG1Q8TAK6 271 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 ACDQ96AP0 544 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 TRPC7Q9HCX4 862 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 GTF3C4Q9UKN8 822 aa14.23□□□□□ -0.13
USF1-206ENST00000491629 AGO2Q9UKV8 859 aaKnown RBP14.23□□□□□ -0.13
USF1-206ENST00000491629 KHNYNO15037 678 aaKnown RBP14.22□□□□□ -0.13
USF1-206ENST00000491629 FAM13AO94988 1023 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 USP17L7P0C7H9 530 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 IFNAR2P48551 515 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 KCNA1Q09470 495 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 SV2CQ496J9 727 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 INTS6LQ5JSJ4 861 aaKnown RBP14.22□□□□□ -0.13
USF1-206ENST00000491629 ANO7Q6IWH7 933 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 C1orf127Q8N9H9 656 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 SH3RF2Q8TEC5 729 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 RLN3Q8WXF3 142 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 ATP2A3Q93084 1043 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 CDK5RAP3Q96JB5 506 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 CNOT6LQ96LI5 555 aaKnown RBP14.22□□□□□ -0.13
USF1-206ENST00000491629 FNBP1Q96RU3 617 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 ACBD6Q9BR61 282 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 TMEM206Q9H813 350 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 DDX43Q9NXZ2 648 aaKnown RBP14.22□□□□□ -0.13
USF1-206ENST00000491629 MBD1Q9UIS9 605 aaPredicted RBP14.22□□□□□ -0.13
USF1-206ENST00000491629 MMP17Q9ULZ9 603 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 PTPRBP23467 1997 aa14.22□□□□□ -0.13
USF1-206ENST00000491629 BPTFQ12830 3046 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 PPP1R37O75864 691 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 TCF3P15923 654 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 PLCG1P19174 1290 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 SCP2P22307 547 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 POLR2BP30876 1174 aaKnown RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 TSPY1Q01534 308 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 CRY1Q16526 586 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 NFE2Q16621 373 aaPredicted RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 UAP1L1Q3KQV9 507 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 USP39Q53GS9 565 aaKnown RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 ARL6IP4Q66PJ3 421 aaKnown RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 KIAA1211LQ6NV74 962 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 CYP2U1Q7Z449 544 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 PIGKQ92643 395 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 RAD54LQ92698 747 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 ZSCAN31Q96LW9 406 aaPredicted RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 STRA6Q9BX79 667 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 ST6GALNAC4Q9H4F1 302 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 ABCB6Q9NP58 842 aa14.21□□□□□ -0.13
USF1-206ENST00000491629 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
USF1-206ENST00000491629 SETXQ7Z333 2677 aaKnown RBP14.2□□□□□ -0.14
USF1-206ENST00000491629 TRAV19A0A0A6YYK7 116 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 GABRDO14764 452 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 HYAL3O43820 417 aaPredicted RBP14.2□□□□□ -0.14
USF1-206ENST00000491629 ATP2C2O75185 946 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 CAPNS1P04632 268 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ITGB3P05106 788 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 CKMP06732 381 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 PTGER3P43115 390 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 SLC6A11P48066 632 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 DHPSP49366 369 aaPredicted RBP14.2□□□□□ -0.14
USF1-206ENST00000491629 USP46P62068 366 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 POU5F1Q01860 360 aaKnown RBP14.2□□□□□ -0.14
USF1-206ENST00000491629 CFAP221Q4G0U5 840 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 EMC10Q5UCC4 262 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 PIP4P1Q86T03 277 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ZHX3Q9H4I2 956 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ZDHHC4Q9NPG8 344 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 EVLQ9UI08 416 aaPredicted RBP14.2□□□□□ -0.14
USF1-206ENST00000491629 SIX4Q9UIU6 781 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 KLK13Q9UKR3 277 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ARHGAP26Q9UNA1 814 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 AGAP1Q9UPQ3 857 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 ACACAQ13085 2346 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 MYH10P35580 1976 aa14.2□□□□□ -0.14
USF1-206ENST00000491629 APC2O95996 2303 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 TMEM8BA6NDV4 472 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 SGK1O00141 431 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 TAF4O00268 1085 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 CYP17A1P05093 508 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 P2RY2P41231 377 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 RPL10AP62906 217 aaKnown RBP14.19□□□□□ -0.14
USF1-206ENST00000491629 FAM193AP78312 1265 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 RING1Q06587 406 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 TRIM61Q5EBN2 209 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 FAM171BQ6P995 826 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 ARMCX6Q7L4S7 300 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 ZNF720Q7Z2F6 126 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 C12orf40Q86WS4 652 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 TMEFF1Q8IYR6 380 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 ALLCQ8N6M5 410 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 IL17RCQ8NAC3 791 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms