RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 MYCT1Q8N699 235 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 SPATA18Q8TC71 538 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 COA7Q96BR5 231 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 SPATA17Q96L03 361 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 UBXN10Q96LJ8 280 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 FAM210AQ96ND0 272 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 OR14A2Q96R54 314 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 MPHOSPH8Q99549 860 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 BAG1Q99933 345 aaPredicted RBP5.25□□□□□ -1.57
RTN4-215ENST00000491592 TREX2Q9BQ50 279 aaPredicted RBP5.25□□□□□ -1.57
RTN4-215ENST00000491592 ADPGKQ9BRR6 497 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 AGO3Q9H9G7 860 aaKnown RBP5.25□□□□□ -1.57
RTN4-215ENST00000491592 MTRRQ9UBK8 725 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 IQSEC2Q5JU85 1478 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 ABCA8O94911 1581 aa5.25□□□□□ -1.57
RTN4-215ENST00000491592 CEP152O94986 1710 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 UBE2QL1A1L167 161 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 NPEPPSL1A6NEC2 478 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 ERICH4A6NGS2 130 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 FAM25EA8MYX2 175 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 GPR42O15529 346 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 HTRA2O43464 458 aaPredicted RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 DTNBO60941 627 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 LETM1O95202 739 aaPredicted RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 ZBED1O96006 694 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 GSPT1P15170 499 aaKnown RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 CASRP41180 1078 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 USP14P54578 494 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 PKN2Q16513 984 aaKnown RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 C3orf36Q3SXR2 165 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 CIR1Q86X95 450 aaPredicted RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 TCP11L2Q8N4U5 519 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 MNS1Q8NEH6 495 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 OR7D4Q8NG98 312 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 SLC30A5Q8TAD4 765 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 DPF2Q92785 391 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 HDAC10Q969S8 669 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 LTV1Q96GA3 475 aaPredicted RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 UHRF1Q96T88 793 aaPredicted RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 BRD9Q9H8M2 597 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 BCO1Q9HAY6 547 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 LANCL2Q9NS86 450 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 ABCF3Q9NUQ8 709 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 WDR35Q9P2L0 1181 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 GIMAP2Q9UG22 337 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 HERC5Q9UII4 1024 aaKnown RBP5.24□□□□□ -1.57
RTN4-215ENST00000491592 GTF3C4Q9UKN8 822 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 LIMCH1Q9UPQ0 1083 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 AGTPBP1Q9UPW5 1226 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 ABCC11Q96J66 1382 aa5.24□□□□□ -1.57
RTN4-215ENST00000491592 PREX2Q70Z35 1606 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 USP32Q8NFA0 1604 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 CCDC154A6NI56 674 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 TPP1O14773 563 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PQBP1O60828 265 aaKnown RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 B3GALNT1O75752 331 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 MBD3O95983 291 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 MTHFD1P11586 935 aaKnown RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 MYCLP12524 364 aaPredicted RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 EDNRBP24530 442 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 SREBF1P36956 1147 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PRPHP41219 470 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 SLC6A9P48067 706 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 MAN2A2P49641 1150 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PDE6CP51160 858 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 HNRNPMP52272 730 aaKnown RBP eCLIP5.23□□□□□ -1.57
RTN4-215ENST00000491592 NPEPPSP55786 919 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PLP2Q04941 152 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 COX10Q12887 443 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 ZXDCQ2QGD7 858 aaPredicted RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 SLC45A4Q5BKX6 768 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 RRP12Q5JTH9 1297 aaKnown RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 IFIT1BQ5T764 474 aaKnown RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 MEX3CQ5U5Q3 659 aaKnown RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 TCTN3Q6NUS6 607 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 GLB1LQ6UWU2 654 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 ATF7IPQ6VMQ6 1270 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 NEK10Q6ZWH5 1172 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PDZD4Q76G19 769 aaPredicted RBP5.23□□□□□ -1.57
RTN4-215ENST00000491592 LIMS2Q7Z4I7 341 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 CHD1LQ86WJ1 897 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 IQCF2Q8IXL9 164 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 FUKQ8N0W3 1084 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 OR5M3Q8NGP4 307 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.23□□□□□ -1.571e-15■■□□□ 12.1
RTN4-215ENST00000491592 GSDMBQ8TAX9 411 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 MGARPQ8TDB4 240 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 ARL8AQ96BM9 186 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 CEP95Q96GE4 821 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 C7orf25Q9BPX7 421 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 TCF25Q9BQ70 676 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 PDCD2LQ9BRP1 358 aa5.23□□□□□ -1.57
RTN4-215ENST00000491592 BDH2Q9BUT1 245 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms