RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 BDNFP23560 247 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 NDUFA8P51970 172 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 MYL6P60660 151 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 PSMC1P62191 440 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 FAM160A1Q05DH4 1040 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 NCOA4Q13772 614 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 MDH1BQ5I0G3 518 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 TXNDC8Q6A555 127 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 KRBA2Q6ZNG9 492 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 INTS8Q75QN2 995 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 LIMS2Q7Z4I7 341 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 OSTM1Q86WC4 334 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 CPA6Q8N4T0 437 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 GPR161Q8N6U8 529 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 STKLD1Q8NE28 680 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 TTC16Q8NEE8 873 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 KBTBD7Q8WVZ9 684 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 RUBCNQ92622 972 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 MYLPFQ96A32 169 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 MED10Q9BTT4 135 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 PTPRJQ12913 1337 aa17.66■□□□□ 0.42
PDLIM2-217ENST00000491330 MAPK13O15264 365 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 KLRC4O43908 158 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 RHOBTB3O94955 611 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 ZNF202O95125 648 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 RTN3O95197 1032 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 SMC2O95347 1197 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 HDCP19113 662 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 LMO2P25791 158 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 IFNAR2P48551 515 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 RUNX3Q13761 415 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 SDHAF4Q5VUM1 108 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 SPEM1Q8N4L4 309 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 PDZD8Q8NEN9 1154 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 PCED1BQ96HM7 432 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 C8orf48Q96LL4 319 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 PKMYT1Q99640 499 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 MKNK1Q9BUB5 465 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 VRTNQ9H8Y1 702 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
PDLIM2-217ENST00000491330 ATP2C2O75185 946 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 PRAMEF12O95522 483 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 ABL1P00519 1130 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 NR2F2P24468 414 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 CTHP32929 405 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 PSMC2P35998 433 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 GPR15P49685 360 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 MTAPQ13126 283 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 POTEHQ6S545 545 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 B3GALNT2Q8NCR0 500 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 KIAA0895Q8NCT3 520 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 TTC8Q8TAM2 541 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 ATP2A3Q93084 1043 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 ZFYVE19Q96K21 471 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 TSG101Q99816 390 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 MRPL45Q9BRJ2 306 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 DMAC2Q9NW81 257 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 GTSE1Q9NYZ3 720 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 NCDNQ9UBB6 729 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 CACNA1HO95180 2353 aa17.64■□□□□ 0.41
PDLIM2-217ENST00000491330 LRRIQ3A6PVS8 624 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 ARNTLO00327 626 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 SLC9A3R1O14745 358 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 PIK3CAP42336 1068 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 VAMP7P51809 220 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 ADAM9Q13443 819 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 DDX42Q86XP3 938 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 ELOA2Q8IYF1 753 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 USP13Q92995 863 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 FAM84AQ96KN4 292 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 SMG9Q9H0W8 520 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 KCTD10Q9H3F6 313 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 CRTAC1Q9NQ79 661 aa17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 DUS2Q9NX74 493 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-217ENST00000491330 SCN1AP35498 2009 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 NRG2O14511 850 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 CHRNB1P11230 501 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 YWHAQP27348 245 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 NOP14P78316 857 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 CLDN10P78369 228 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 ENPEPQ07075 957 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 STIM1Q13586 685 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 MTF1Q14872 753 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 PON2Q15165 354 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 FBXO43Q4G163 708 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 UNC93AQ86WB7 457 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 NUP93Q8N1F7 819 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 TTC39CQ8N584 583 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 ZNF516Q92618 1163 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 RSPRY1Q96DX4 576 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 TIGD1Q96MW7 591 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 NACA2Q9H009 215 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 PRMT8Q9NR22 394 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 COMMD8Q9NX08 183 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 GMEB2Q9UKD1 530 aa17.62■□□□□ 0.41
PDLIM2-217ENST00000491330 F8VP50 259 aa17.61■□□□□ 0.41
PDLIM2-217ENST00000491330 CETN3O15182 167 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms