RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SLC8A3P57103 927 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 POLR2FP61218 127 aaKnown RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 APBA1Q02410 837 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 PTK2Q05397 1052 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 DRAP1Q14919 205 aaPredicted RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 ARHGAP44Q17R89 818 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 LCLAT1Q6UWP7 414 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 TMC5Q6UXY8 1006 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 ANKRD52Q8NB46 1076 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 SMG7Q92540 1137 aaKnown RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 MYRFLQ96LU7 910 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 ZNF512Q96ME7 567 aaPredicted RBP16.79■□□□□ 0.28
TRA2A-208ENST00000490942 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 RBSNQ9H1K0 784 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 COMMD8Q9NX08 183 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 IFNKQ9P0W0 207 aa16.79■□□□□ 0.28
TRA2A-208ENST00000490942 H3BQ06 376 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 FOXN3O00409 490 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 MBTPS2O43462 519 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 CSH1P0DML2 217 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 CSH2P0DML3 217 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 CCDC130P13994 396 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 CD19P15391 556 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 NPR3P17342 541 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 GRIK1P39086 918 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 KLK7P49862 253 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 ORC1Q13415 861 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 RAPGEF1Q13905 1077 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 CCDC142Q17RM4 750 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 PPP1R26Q5T8A7 1209 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 TTC9BQ8N6N2 239 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 C12orf76Q8N812 135 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 SPAG5Q96R06 1193 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 MED10Q9BTT4 135 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 PIDD1Q9HB75 910 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 WDR6Q9NNW5 1121 aaKnown RBP16.78■□□□□ 0.28
TRA2A-208ENST00000490942 KRT82Q9NSB4 513 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 FAM49BQ9NUQ9 324 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 HESX1Q9UBX0 185 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
TRA2A-208ENST00000490942 A0A1W2PQJ5 194 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 GRXCR2A6NFK2 248 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 SOBPA7XYQ1 873 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 EPHB6O15197 1021 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 CCL16O15467 120 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 AP1G2O75843 785 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 CCDC172P0C7W6 258 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 SETSIPP0DME0 302 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 GNA15P30679 374 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 SOX5P35711 763 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 STAT1P42224 750 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 BCAT1P54687 386 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 MRPS5P82675 430 aaKnown RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 CBX2Q14781 532 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 CLEC20AQ6ZU45 233 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 CACNA2D4Q7Z3S7 1137 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 LPIN3Q9BQK8 851 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 TTYH3Q9C0H2 523 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 UXTQ9UBK9 157 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 AJAP1Q9UKB5 411 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 USTQ9Y2C2 406 aa16.77■□□□□ 0.28
TRA2A-208ENST00000490942 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-208ENST00000490942 PTPRDP23468 1912 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 F8VP50 259 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 CLDN5O00501 218 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 ZNF197O14709 1029 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 RTN3O95197 1032 aaPredicted RBP16.76■□□□□ 0.27
TRA2A-208ENST00000490942 PKDCCQ504Y2 493 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
TRA2A-208ENST00000490942 DENND5BQ6ZUT9 1274 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 ZNF677Q86XU0 584 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 SCN4BQ8IWT1 228 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 ZNF606Q8WXB4 792 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 TFAP2BQ92481 460 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 TTLL2Q9BWV7 592 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 LRRC3Q9BY71 257 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 ASAH2Q9NR71 780 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 IL37Q9NZH6 218 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 DNMT3BQ9UBC3 853 aaKnown RBP16.76■□□□□ 0.27
TRA2A-208ENST00000490942 PCDHGC3Q9UN70 934 aa16.76■□□□□ 0.27
TRA2A-208ENST00000490942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.76■□□□□ 0.273e-9■□□□□ 10.4
TRA2A-208ENST00000490942 ZFP37Q9Y6Q3 630 aaPredicted RBP16.76■□□□□ 0.27
TRA2A-208ENST00000490942 NCANO14594 1321 aa16.75■□□□□ 0.27
TRA2A-208ENST00000490942 CLUHO75153 1309 aa16.75■□□□□ 0.27
TRA2A-208ENST00000490942 FAM92AA1XBS5 289 aa16.75■□□□□ 0.27
TRA2A-208ENST00000490942 CYP26A1O43174 497 aa16.75■□□□□ 0.27
TRA2A-208ENST00000490942 HMGA1P17096 107 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms