RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 PCED1BQ96HM7 432 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 CHAMP1Q96JM3 812 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 FAM83CQ9BQN1 747 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
UBA1-209ENST00000490869 HPS4Q9NQG7 708 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 NXF1Q9UBU9 619 aaKnown RBP11.65□□□□□ -0.54
UBA1-209ENST00000490869 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 ZDHHC9Q9Y397 364 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 NME7Q9Y5B8 376 aa11.65□□□□□ -0.54
UBA1-209ENST00000490869 KIF26AQ9ULI4 1882 aaPredicted RBP11.65□□□□□ -0.54
UBA1-209ENST00000490869 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 TRIM66O15016 1216 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 CLSTN1O94985 981 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 STAU1O95793 577 aaKnown RBP11.64□□□□□ -0.55
UBA1-209ENST00000490869 FAM163BP0C2L3 166 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 USP17L7P0C7H9 530 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 ANXA13P27216 316 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 ATICP31939 592 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 SATB1Q01826 763 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 BIRC3Q13489 604 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
UBA1-209ENST00000490869 Q6ZS52 159 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 KIAA2013Q8IYS2 634 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 SPEM1Q8N4L4 309 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 RIN3Q8TB24 985 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 SYAP1Q96A49 352 aaPredicted RBP11.64□□□□□ -0.55
UBA1-209ENST00000490869 SPATA17Q96L03 361 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 CEP295NLQ96MC4 621 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 CYP2S1Q96SQ9 504 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 XYLT2Q9H1B5 865 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 EPC1Q9H2F5 836 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 EBF3Q9H4W6 596 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 NCDNQ9UBB6 729 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 DENND4CQ5VZ89 1909 aa11.64□□□□□ -0.55
UBA1-209ENST00000490869 DMDP11532 3685 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 C2orf78A6NCI8 922 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 LRRIQ3A6PVS8 624 aaPredicted RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 A8MXQ7 604 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 MYL1P05976 194 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 CKMP06732 381 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 ARSAP15289 507 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 PTPN1P18031 435 aaKnown RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 SYKP43405 635 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 ID4P47928 161 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 AP3M2P53677 418 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 CCINQ13939 588 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 KCNB1Q14721 858 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 MTF1Q14872 753 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 PDGFRLQ15198 375 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 ZNF699Q32M78 642 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 TDRD10Q5VZ19 366 aaKnown RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 DENND5BQ6ZUT9 1274 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 ARL14EPQ8N8R7 260 aaPredicted RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 PARD3BQ8TEW8 1205 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 SLC22A12Q96S37 553 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 KCTD10Q9H3F6 313 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 DPEP3Q9H4B8 488 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 DMAC2Q9NW81 257 aa11.63□□□□□ -0.55
UBA1-209ENST00000490869 SMG5Q9UPR3 1016 aaKnown RBP11.63□□□□□ -0.55
UBA1-209ENST00000490869 ZFHX2Q9C0A1 2572 aaPredicted RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 FAM237AA0A1B0GTK4 181 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 OTOL1A6NHN0 477 aaPredicted RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 F8VP50 259 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 PDXKO00764 312 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 C4BPAP04003 597 aaKnown RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 NR3C1P04150 777 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 HDCP19113 662 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 PDE6CP51160 858 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 NDUFA8P51970 172 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 USP46P62068 366 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 DLG4P78352 724 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 CLDN10P78369 228 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 AMPD2Q01433 879 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 USP4Q13107 963 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 NCOA4Q13772 614 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 ZNF77Q15935 545 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 ZNF667Q5HYK9 610 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 SYNPOQ8N3V7 929 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 B3GALNT2Q8NCR0 500 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 TMEM174Q8WUU8 243 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 SECISBP2LQ93073 1101 aaKnown RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 CCDC47Q96A33 483 aaKnown RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 CHFRQ96EP1 664 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 C8orf48Q96LL4 319 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 TTLL2Q9BWV7 592 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 ZNF518BQ9C0D4 1074 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 ELOVL4Q9GZR5 314 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 SMYD3Q9H7B4 428 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
UBA1-209ENST00000490869 DUS2Q9NX74 493 aaKnown RBP11.62□□□□□ -0.55
UBA1-209ENST00000490869 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms