RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ITPK1Q13572 414 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 SLC9C1Q4G0N8 1177 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 PABPC1LQ4VXU2 614 aaKnown RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 CCDC93Q567U6 631 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 FAM47AQ5JRC9 791 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF529Q6P280 563 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF761Q86XN6 746 aaPredicted RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 RASAL3Q86YV0 1011 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ANKRD42Q8N9B4 389 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 SLC35B2Q8TB61 432 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ATXN2LQ8WWM7 1075 aaKnown RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 DACT3Q96B18 629 aaPredicted RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ASB2Q96Q27 587 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 PACSIN1Q9BY11 444 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 JADE2Q9NQC1 790 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 STARD7Q9NQZ5 370 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 TRMT13Q9NUP7 481 aaKnown RBP5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 SLC23A1Q9UHI7 598 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 PCDHGB2Q9Y5G2 931 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF462Q96JM2 2506 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 CARMIL3Q8ND23 1372 aa5.8□□□□□ -1.48
SSX2IP-208ENST00000490476 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 A0A1W2PRX2 142 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 CXorf49A8MYA2 514 aaPredicted RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 SLC26A4O43511 780 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 STC2O76061 302 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 FARP2O94887 1054 aaPredicted RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 IL18RAPO95256 599 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 PARP1P09874 1014 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 MTHFD1P11586 935 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 PPM1AP35813 382 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 FLT3LGP49771 235 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 LINC00310P59036 64 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 PSMC1P62191 440 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 ADAM8P78325 824 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 INO80DQ53TQ3 878 aaPredicted RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 IZUMO3Q5VZ72 239 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 ANKS6Q68DC2 871 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 UBE2Q1Q7Z7E8 422 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 ADGRE4PQ86SQ3 457 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 XYLT1Q86Y38 959 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 OR6B3Q8NGW1 331 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 RABGGTAQ92696 567 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF622Q969S3 477 aaKnown RBP eCLIP5.79□□□□□ -1.484e-9■■□□□ 12.9
SSX2IP-208ENST00000490476 MBD6Q96DN6 1003 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 SLC38A3Q99624 504 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 UNKQ9C0B0 810 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 KCNH6Q9H252 994 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 BRD9Q9H8M2 597 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 SRRDQ9UH36 339 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 AFF4Q9UHB7 1163 aaKnown RBP5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 CEP83Q9Y592 693 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 REV3LO60673 3130 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 COL4A5P29400 1685 aa5.79□□□□□ -1.48
SSX2IP-208ENST00000490476 LAMB1P07942 1786 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SSC5DA1L4H1 1573 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SMIM22K7EJ46 135 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 FOXN3O00409 490 aaPredicted RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 APOL1O14791 398 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 MATN4O95460 622 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 KRT1P04264 644 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 GJB1P08034 283 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 TSHRP16473 764 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 HALP42357 657 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 RAC3P60763 192 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 MRPL49Q13405 166 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 PMS2P11Q13670 270 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 RIN1Q13671 783 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 DAG1Q14118 895 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 C4orf46Q504U0 113 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 HIBCHQ6NVY1 386 aaPredicted RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 CCDC174Q6PII3 467 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 ZNF783Q6ZMS7 281 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 FAM124AQ86V42 546 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 POU5F2Q8N7G0 328 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SHCBP1Q8NEM2 672 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 TMEM176AQ96HP8 235 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SUCLG2Q96I99 432 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 PPP1R16BQ96T49 567 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 DPYSL5Q9BPU6 564 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 TCF25Q9BQ70 676 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SELENOOQ9BVL4 669 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 WDR12Q9GZL7 423 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 R3HDMLQ9H3Y0 253 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 ADARB2Q9NS39 739 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 GJB4Q9NTQ9 266 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 THEGQ9P2T0 379 aa5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 MORC2Q9Y6X9 1032 aaPredicted RBP5.78□□□□□ -1.48
SSX2IP-208ENST00000490476 CCDC189A1A4V9 331 aa5.77□□□□□ -1.49
SSX2IP-208ENST00000490476 BTN3A1O00481 513 aa5.77□□□□□ -1.49
SSX2IP-208ENST00000490476 HOXA3O43365 443 aaPredicted RBP5.77□□□□□ -1.49
SSX2IP-208ENST00000490476 HARSP12081 509 aaKnown RBP5.77□□□□□ -1.49
SSX2IP-208ENST00000490476 RPS16P62249 146 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms