RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 RALGAPA1Q6GYQ0 2036 aa11.09□□□□□ -0.63
TTC28-207ENST00000490475 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
TTC28-207ENST00000490475 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 SPAG17Q6Q759 2223 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 TRAV19A0A0A6YYK7 116 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 NOL4O94818 638 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 PRAMEF12O95522 483 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 USP17L7P0C7H9 530 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 HMGA1P17096 107 aaKnown RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 DRD1P21728 446 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 WNT7BP56706 349 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 SIM2Q14190 667 aaPredicted RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 PON2Q15165 354 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 BMT2Q1RMZ1 405 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 HS2ST1Q7LGA3 356 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 CPA6Q8N4T0 437 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 DCLK2Q8N568 766 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 RDH13Q8NBN7 331 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 RSPRY1Q96DX4 576 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 HPDLQ96IR7 371 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 SPATA17Q96L03 361 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 FNBP1Q96RU3 617 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 FAM83CQ9BQN1 747 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 MTMR12Q9C0I1 747 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 PDE11AQ9HCR9 933 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 AGPAT3Q9NRZ7 376 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 MAGEC2Q9UBF1 373 aaPredicted RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 MAGED2Q9UNF1 606 aaPredicted RBP11.08□□□□□ -0.64
TTC28-207ENST00000490475 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 DCHS1Q96JQ0 3298 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 NCANO14594 1321 aa11.08□□□□□ -0.64
TTC28-207ENST00000490475 OBSL1O75147 1896 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 TRIM66O15016 1216 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 AKAP3O75969 853 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 TCF3P15923 654 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 ANXA13P27216 316 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 CYP2J2P51589 502 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 SATB1Q01826 763 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 KCNB1Q14721 858 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
TTC28-207ENST00000490475 TMEM196Q5HYL7 178 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 PRR23BQ6ZRT6 265 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 CEP68Q76N32 757 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.07□□□□□ -0.64
TTC28-207ENST00000490475 WDR5BQ86VZ2 330 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 CAMKK1Q8N5S9 505 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 DDX1Q92499 740 aaKnown RBP11.07□□□□□ -0.64
TTC28-207ENST00000490475 USP13Q92995 863 aaPredicted RBP11.07□□□□□ -0.64
TTC28-207ENST00000490475 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
TTC28-207ENST00000490475 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 ZFYVE19Q96K21 471 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 FAM84AQ96KN4 292 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 HSPBP1Q9NZL4 362 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
TTC28-207ENST00000490475 CHURC1-FNTBB4DL54 471 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 K7ESF4 209 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TACC1O75410 805 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 CKMP06732 381 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TNNI1P19237 187 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
TTC28-207ENST00000490475 WARSP23381 471 aaKnown RBP11.06□□□□□ -0.64
TTC28-207ENST00000490475 CYP2F1P24903 491 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 ATICP31939 592 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SOX9P48436 509 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 IFNAR2P48551 515 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 AP3M2P53677 418 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 UBE2HP62256 183 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 GAS6Q14393 721 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 MTF1Q14872 753 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
TTC28-207ENST00000490475 DDR2Q16832 855 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SOWAHAQ2M3V2 549 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TXNDC8Q6A555 127 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SCARA3Q6AZY7 606 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TXNDC11Q6PKC3 985 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 LIMS2Q7Z4I7 341 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 TMEM150AQ86TG1 271 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
TTC28-207ENST00000490475 XXYLT1Q8NBI6 393 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 CXorf38Q8TB03 319 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 NETO1Q8TDF5 533 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 OSCP1Q8WVF1 389 aa11.06□□□□□ -0.64
TTC28-207ENST00000490475 ACDQ96AP0 544 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms