RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 CYP26A1O43174 497 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 MBTPS2O43462 519 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 NOL4O94818 638 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 TPM3P06753 285 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 PAEPP09466 180 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 FAM200BP0CF97 657 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
FARP1-207ENST00000490389 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
FARP1-207ENST00000490389 HOXA9P31269 272 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 MTHFRP42898 656 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 MAGEA11P43364 429 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
FARP1-207ENST00000490389 IFRD2Q12894 506 aaPredicted RBP13.17□□□□□ -0.3
FARP1-207ENST00000490389 NR1I3Q14994 352 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 GOLGA7BQ2TAP0 167 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 RTL10Q7L3V2 364 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 SHC3Q92529 594 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 SMARCD1Q96GM5 515 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 SPAG5Q96R06 1193 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
FARP1-207ENST00000490389 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 CEP72Q9P209 647 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 REV3LO60673 3130 aa13.17□□□□□ -0.3
FARP1-207ENST00000490389 SPTBN5Q9NRC6 3674 aaKnown RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 TRIM66O15016 1216 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 THAP12O43422 761 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 VDRP11473 427 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 MYL4P12829 197 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 IL9P15248 144 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 PTPN2P17706 415 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 RFX1P22670 979 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 ZNF132P52740 706 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 ITIH5Q86UX2 942 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 POMKQ9H5K3 350 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 DNMT3BQ9UBC3 853 aaKnown RBP13.16□□□□□ -0.3
FARP1-207ENST00000490389 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 TSPAN16Q9UKR8 245 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
FARP1-207ENST00000490389 PLXNA3P51805 1871 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 SLC38A8A6NNN8 435 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 F8VZ95 297 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 BEST1O76090 585 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 GFPT2O94808 682 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 RHOP08100 348 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 GNA15P30679 374 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
FARP1-207ENST00000490389 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
FARP1-207ENST00000490389 GET4Q7L5D6 327 aaPredicted RBP13.15□□□□□ -0.3
FARP1-207ENST00000490389 UBA3Q8TBC4 463 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 ATXN2LQ8WWM7 1075 aaKnown RBP13.15□□□□□ -0.3
FARP1-207ENST00000490389 SUSD6Q92537 303 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 PSMG2Q969U7 264 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 NECTIN4Q96NY8 510 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 SMOQ99835 787 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 GPR88Q9GZN0 384 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 KIAA1257Q9ULG3 409 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
FARP1-207ENST00000490389 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
FARP1-207ENST00000490389 CLUHO75153 1309 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 COL6A3P12111 3177 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 A0A1W2PQC6 194 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 M0QYV0 167 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 O00370 1275 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 MICAL2O94851 1124 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 POU2F2P09086 479 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 CSH1P0DML2 217 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 CSH2P0DML3 217 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 GJA1P17302 382 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 NPR3P17342 541 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 FSHRP23945 695 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 SLC8A3P57103 927 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 ARID5AQ03989 594 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 PTK2Q05397 1052 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 CYP26C1Q6V0L0 522 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
FARP1-207ENST00000490389 DENND5BQ6ZUT9 1274 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms