RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 TMEM201Q5SNT2 666 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 L1TD1Q5T7N2 865 aaKnown RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 ZBTB37Q5TC79 503 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 ATF7IP2Q5U623 682 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 GRASPQ7Z6J2 395 aaPredicted RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 USP37Q86T82 979 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 GPBP1Q86WP2 473 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 C4orf19Q8IY42 314 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 OR6P1Q8NGX9 317 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 RSAD2Q8WXG1 361 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 HAS1Q92839 578 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 KIFAP3Q92845 792 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 CALML4Q96GE6 196 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 MSLNLQ96KJ4 702 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 ZSCAN31Q96LW9 406 aaPredicted RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 KLHL5Q96PQ7 755 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 GCNAQ96QF7 691 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 KXD1Q9BQD3 176 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 WNT10AQ9GZT5 417 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 TMEM60Q9H2L4 133 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 PDZD7Q9H5P4 517 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 CYP4F11Q9HBI6 524 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 TUFT1Q9NNX1 390 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 SSU72Q9NP77 194 aaKnown RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 KCNMB3Q9NPA1 279 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 ANKEF1Q9NU02 776 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 SPATA6Q9NWH7 488 aaPredicted RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 NCDNQ9UBB6 729 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 STK39Q9UEW8 545 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 ADAM28Q9UKQ2 775 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 DNM3Q9UQ16 869 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 TCF20Q9UGU0 1960 aaKnown RBP4.3□□□□□ -1.72
RPN1-205ENST00000490166 MYH7BA7E2Y1 1941 aa4.3□□□□□ -1.72
RPN1-205ENST00000490166 PTPRSQ13332 1948 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PHLPP2Q6ZVD8 1323 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CDH23Q9H251 3354 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CYP3A7-CYP3A51PA0A087WV96 503 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 E9PMD0 336 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 K7ERI5 159 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PODXLO00592 558 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 HNRNPDLO14979 420 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 TRAPPC3O43617 180 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 NARSO43776 548 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 B4GALT3O60512 393 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 HTR3BO95264 441 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 WNT11O96014 354 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 NCLP19338 710 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 CYP3A7P24462 503 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 GJB2P29033 226 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CDC25AP30304 524 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 UBA7P41226 1012 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 NAMPTP43490 491 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CLCN4P51793 760 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CLCQ05315 142 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 ELAVL2Q12926 359 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 TUSC3Q13454 348 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 TDGQ13569 410 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CAMK1Q14012 370 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 TARBP2Q15633 366 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 IQCEQ6IPM2 695 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SYCE2Q6PIF2 218 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PDZD4Q76G19 769 aaPredicted RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 ZNF765Q7L2R6 523 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 TAS1R1Q7RTX1 841 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 FRMD5Q7Z6J6 570 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CATSPER3Q86XQ3 398 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 UBALD2Q8IYN6 164 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SYCP3Q8IZU3 236 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SHISA5Q8N114 240 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 MYCT1Q8N699 235 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 KCT2Q8NC54 265 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PRSS33Q8NF86 280 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 TTC8Q8TAM2 541 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SLC22A17Q8WUG5 538 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CRYGNQ8WXF5 182 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 ISL2Q96A47 359 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 MCRS1Q96EZ8 462 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SHDQ96IW2 340 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SEPT5Q99719 369 aaPredicted RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 SRRTQ9BXP5 876 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 MRPL4Q9BYD3 311 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 DHX33Q9H6R0 707 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 TBC1D17Q9HA65 648 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 XPNPEP1Q9NQW7 623 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.29□□□□□ -1.72
RPN1-205ENST00000490166 MARCH5Q9NX47 278 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 NDRG2Q9UN36 371 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 GIT1Q9Y2X7 761 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 PCDHB14Q9Y5E9 798 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 CDY1Q9Y6F8 540 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 EYSQ5T1H1 3165 aa4.29□□□□□ -1.72
RPN1-205ENST00000490166 PRRC2BQ5JSZ5 2229 aaKnown RBP4.29□□□□□ -1.72
RPN1-205ENST00000490166 NPHP3-ACAD11A0A0J9YXS1 232 aa4.28□□□□□ -1.72
RPN1-205ENST00000490166 LOC730098B7Z3J9 87 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms