RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CCDC127Q96BQ5 260 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 HINFPQ9BQA5 517 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 EBF3Q9H4W6 596 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 GCNT4Q9P109 453 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 UXTQ9UBK9 157 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 SERTAD1Q9UHV2 236 aa20.77■□□□□ 0.92
TNFRSF1B-202ENST00000489921 ATG2BQ96BY7 2078 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 C2orf78A6NCI8 922 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TACC1O75410 805 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ARSAP15289 507 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TNNI1P19237 187 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 BDNFP23560 247 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KNOP1Q1ED39 458 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SCN4BQ8IWT1 228 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PCED1BQ96HM7 432 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CHAMP1Q96JM3 812 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SPATA17Q96L03 361 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 XYLT2Q9H1B5 865 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KIF9Q9HAQ2 790 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FBRSL1Q9HCM7 1045 aaKnown RBP20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FAM13BQ9NYF5 915 aa20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MAGEC2Q9UBF1 373 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1B-202ENST00000489921 HRO43593 1189 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SLFN14P0C7P3 912 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CASP4P49662 377 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 USP46P62068 366 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ZXDBP98169 803 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 STK4Q13043 487 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ZNF77Q15935 545 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TMEM196Q5HYL7 178 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FSTL4Q6MZW2 842 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PKN3Q6P5Z2 889 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 VSTM1Q6UX27 236 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 C4orf50Q6ZRC1 276 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ERMP1Q7Z2K6 904 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MYCBPAPQ8TBZ2 947 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PAGE5Q96GU1 130 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MMS19Q96T76 1030 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TMEM30AQ9NV96 361 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 DMAC2Q9NW81 257 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CGNQ9P2M7 1197 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CFAP45Q9UL16 551 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ZDHHC9Q9Y397 364 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 R3HCC1Q9Y3T6 440 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MYO16Q9Y6X6 1858 aa20.75■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CHURC1-FNTBB4DL54 471 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TRDMT1O14717 391 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 STAU1O95793 577 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FAM163BP0C2L3 166 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 GNL1P36915 607 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FNTBP49356 437 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CACNA2D1P54289 1103 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MYL6P60660 151 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FOXK2Q01167 660 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FAM160A1Q05DH4 1040 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PPP2R5DQ14738 602 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 NAIF1Q69YI7 327 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SYNPOQ8N3V7 929 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 ARL14EPQ8N8R7 260 aaPredicted RBP20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KIAA0895Q8NCT3 520 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 FNBP1Q96RU3 617 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 DPEP3Q9H4B8 488 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 NCDNQ9UBB6 729 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 LAMA1P25391 3075 aa20.74■□□□□ 0.91
TNFRSF1B-202ENST00000489921 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CLDN10P78369 228 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 USP4Q13107 963 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 SRSF5Q13243 272 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MAPRE1Q15691 268 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 WDR72Q3MJ13 1102 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 HS2ST1Q7LGA3 356 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TMEM174Q8WUU8 243 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TRPC7Q9HCX4 862 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PARD6AQ9NPB6 346 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 DLL3Q9NYJ7 618 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 HPSEQ9Y251 543 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KIAA1549LQ6ZVL6 1849 aa20.73■□□□□ 0.91
TNFRSF1B-202ENST00000489921 EML5Q05BV3 1969 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 USP17L7P0C7H9 530 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PTPN1P18031 435 aaKnown RBP20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 HOXA6P31267 233 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 GRIK1P39086 918 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CYP27A1Q02318 531 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MTF1Q14872 753 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 MDH1BQ5I0G3 518 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PARD3BQ8TEW8 1205 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 OSCP1Q8WVF1 389 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CEP295NLQ96MC4 621 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TTLL2Q9BWV7 592 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 KCTD10Q9H3F6 313 aa20.72■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TRAV19A0A0A6YYK7 116 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 A0A1B0GVL5 298 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 LRRIQ3A6PVS8 624 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 EXOC3O60645 756 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 C4BPAP04003 597 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 TCF3P15923 654 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 PFKFB1P16118 471 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 CMA1P23946 247 aa20.71■□□□□ 0.91
TNFRSF1B-202ENST00000489921 GJA4P35212 333 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms