RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SCARA3Q6AZY7 606 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 IQSEC1Q6DN90 963 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 LCLAT1Q6UWP7 414 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 CCDC121Q6ZUS5 278 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 CENPUQ71F23 418 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 EXOC3L1Q86VI1 746 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 VSIG1Q86XK7 387 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 TDRPQ86YL5 185 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 SEC16BQ96JE7 1060 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 KATNBL1Q9H079 304 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 ABHD16BQ9H3Z7 469 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 RSAD1Q9HA92 442 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 SLC5A4Q9NY91 659 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 SENP1Q9P0U3 644 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 FETUBQ9UGM5 382 aa15.72■□□□□ 0.11
COL9A1-208ENST00000489611 TSPAN1O60635 241 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 AOC2O75106 756 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 MICAL2O94851 1124 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 SETSIPP0DME0 302 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 KDELR1P24390 212 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 GPD2P43304 727 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 SLCO1A2P46721 670 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 PLCB3Q01970 1234 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 LONRF1Q17RB8 773 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 KCTD19Q17RG1 926 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-208ENST00000489611 TMEM192Q8IY95 271 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 CMASQ8NFW8 434 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-208ENST00000489611 MAML3Q96JK9 1138 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 CPXM1Q96SM3 734 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 NT5C1AQ9BXI3 368 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 LRRC4CQ9HCJ2 640 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 DPP3Q9NY33 737 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 KAT6AQ92794 2004 aa15.71■□□□□ 0.11
COL9A1-208ENST00000489611 GOLGA6L7A0A1B0GV03 622 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SLC15A5A6NIM6 579 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 GOLGA8SH3BPF8 625 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SNAI1O95863 264 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 VPS41P49754 854 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ZNF143P52747 638 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SLC18A1P54219 525 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 GPS1Q13098 491 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ITIH4Q14624 930 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 MDM1Q8TC05 714 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 CNPY3Q9BT09 278 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ELOVL4Q9GZR5 314 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SDCBP2Q9H190 292 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SAMD15Q9P1V8 674 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ZNF236Q9UL36 1845 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 APOC4-APOC2K7ER74 178 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 M0QYV0 167 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 SGK1O00141 431 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 APOC2P02655 101 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 TCF4P15884 667 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 TSHRP16473 764 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 RAP1GAPP47736 663 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 CDH8P55286 799 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 GRIK4Q16099 956 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 FAM47CQ5HY64 1035 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 MORN1Q5T089 497 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 GJC2Q5T442 439 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 RNASEH2BQ5TBB1 312 aaKnown RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 PPP1R21Q6ZMI0 780 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 CDR2LQ86X02 465 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ZDHHC17Q8IUH5 632 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ZNF784Q8NCA9 323 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 UHMK1Q8TAS1 419 aaKnown RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 PLCD4Q9BRC7 762 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 METTL5Q9NRN9 209 aaKnown RBP15.7■□□□□ 0.1
COL9A1-208ENST00000489611 KLHL11Q9NVR0 708 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 CYTH4Q9UIA0 394 aa15.7■□□□□ 0.1
COL9A1-208ENST00000489611 ALOX15BO15296 676 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 VTNP04004 478 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 ERBB2P04626 1255 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 STIP1P31948 543 aaKnown RBP15.69■□□□□ 0.1
COL9A1-208ENST00000489611 IFT88Q13099 833 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 TFDP2Q14188 446 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 CCDC142Q17RM4 750 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 MAP7D3Q8IWC1 876 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 LRRC52Q8N7C0 313 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 DYDC1Q8WWB3 177 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 SGSM3Q96HU1 749 aa15.69■□□□□ 0.1
COL9A1-208ENST00000489611 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-208ENST00000489611 GCOM2Q9BZD3 368 aaPredicted RBP15.69■□□□□ 0.1
COL9A1-208ENST00000489611 CA12O43570 354 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 CST8O60676 142 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 MMP3P08254 477 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 GHRP10912 638 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 AXLP30530 894 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 PHBP35232 272 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 ADCYAP1R1P41586 468 aa15.68■□□□□ 0.1
COL9A1-208ENST00000489611 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
COL9A1-208ENST00000489611 DEFB115Q30KQ5 88 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms