RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 C4orf47A7E2U8 309 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
TOP3B-217ENST00000489581 KRT19P08727 400 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
TOP3B-217ENST00000489581 SPATA2LQ8IUW3 424 aaPredicted RBP18.21■□□□□ 0.51
TOP3B-217ENST00000489581 BRSK2Q8IWQ3 736 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 TMEM86AQ8N2M4 240 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 SH3RF2Q8TEC5 729 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
TOP3B-217ENST00000489581 ACDQ96AP0 544 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 ACCSQ96QU6 501 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 STRA6Q9BX79 667 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 GCNT4Q9P109 453 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 EXOC7Q9UPT5 735 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 SNX9Q9Y5X1 595 aa18.21■□□□□ 0.51
TOP3B-217ENST00000489581 MYMKA6NI61 221 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 GIPC1O14908 333 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 NOVA1P51513 510 aaKnown RBP18.2■□□□□ 0.5
TOP3B-217ENST00000489581 SEC13P55735 322 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 NR1H3Q13133 447 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
TOP3B-217ENST00000489581 LRRC52Q8N7C0 313 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 FSIP1Q8NA03 581 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 TSTD1Q8NFU3 115 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 CXorf38Q8TB03 319 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 TPSD1Q9BZJ3 242 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 RBAKQ9NYW8 714 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-217ENST00000489581 RALYQ9UKM9 306 aaKnown RBP18.2■□□□□ 0.5
TOP3B-217ENST00000489581 FRYQ5TBA9 3013 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 PCNX2A6NKB5 2137 aa18.2■□□□□ 0.5
TOP3B-217ENST00000489581 FAM208BQ5VWN6 2430 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 ANTXRLA6NF34 631 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 GCNT3O95395 438 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
TOP3B-217ENST00000489581 HDCP19113 662 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 LHX1P48742 406 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 KCNB1Q14721 858 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 C8orf34Q49A92 452 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 CFAP221Q4G0U5 840 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 C2orf27AQ580R0 203 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 ADGRF2Q8IZF7 708 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 PCIF1Q9H4Z3 704 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 PDE11AQ9HCR9 933 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 GDAP2Q9NXN4 497 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 SEL1LQ9UBV2 794 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 ITGA11Q9UKX5 1188 aa18.19■□□□□ 0.5
TOP3B-217ENST00000489581 LNP1A1A4G5 178 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 GABRDO14764 452 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 ATP2C2O75185 946 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 PCSK1P29120 753 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 CASP5P51878 434 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 RBP5P82980 135 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 SOWAHAQ2M3V2 549 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 USP39Q53GS9 565 aaKnown RBP18.18■□□□□ 0.5
TOP3B-217ENST00000489581 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 LMBRD2Q68DH5 695 aaPredicted RBP18.18■□□□□ 0.5
TOP3B-217ENST00000489581 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 SYCP3Q8IZU3 236 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 TOP6BLQ8N6T0 577 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 USP33Q8TEY7 942 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 DNAJC19Q96DA6 116 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 FUBP3Q96I24 572 aaKnown RBP eCLIP18.18■□□□□ 0.5
TOP3B-217ENST00000489581 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 MTMR12Q9C0I1 747 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 STK17AQ9UEE5 414 aa18.18■□□□□ 0.5
TOP3B-217ENST00000489581 K7EQS6 105 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 TMEM191BP0C7N4 346 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 GAP43P17677 238 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 BCKDHBP21953 392 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 GARTP22102 1010 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 LMO2P25791 158 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 OPRD1P41143 372 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 PSMC1P62191 440 aaKnown RBP18.17■□□□□ 0.5
TOP3B-217ENST00000489581 ZXDBP98169 803 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 DAB2IPQ5VWQ8 1189 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 PMS2CLQ68D20 193 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 ANO7Q6IWH7 933 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 FAM171BQ6P995 826 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 TTC30AQ86WT1 665 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 SPATA18Q8TC71 538 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 MAGEC2Q9UBF1 373 aaPredicted RBP18.17■□□□□ 0.5
TOP3B-217ENST00000489581 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 ARHGAP26Q9UNA1 814 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 PCDHB13Q9Y5F0 798 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
TOP3B-217ENST00000489581 C1QTNF9BB2RNN3 333 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 PATE3B3GLJ2 98 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 KHNYNO15037 678 aaKnown RBP18.16■□□□□ 0.5
TOP3B-217ENST00000489581 NFATC1O95644 943 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 PROS1P07225 676 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 C1QTNF9P0C862 333 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 IDEP14735 1019 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 TCF3P15923 654 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 BDNFP23560 247 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 MAGEA11P43364 429 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
TOP3B-217ENST00000489581 RRAGBQ5VZM2 374 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms