RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 C1orf127Q8N9H9 656 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 SPATA18Q8TC71 538 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 EPSTI1Q96J88 318 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 EDEM2Q9BV94 578 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 IKZF4Q9H2S9 585 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 FBRSL1Q9HCM7 1045 aaKnown RBP11.14□□□□□ -0.63
CHKB-211ENST00000489453 POLR3BQ9NW08 1133 aaPredicted RBP11.14□□□□□ -0.63
CHKB-211ENST00000489453 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
CHKB-211ENST00000489453 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
CHKB-211ENST00000489453 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
CHKB-211ENST00000489453 TADA3O75528 432 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 PPP1R37O75864 691 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 CAVIN2O95810 425 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 HDCP19113 662 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 PMLP29590 882 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 STAT6P42226 847 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 SEC13P55735 322 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 USP39Q53GS9 565 aaKnown RBP11.13□□□□□ -0.63
CHKB-211ENST00000489453 DAB2IPQ5VWQ8 1189 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 NAIF1Q69YI7 327 aaPredicted RBP11.13□□□□□ -0.63
CHKB-211ENST00000489453 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 PSAPL1Q6NUJ1 521 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 RIN3Q8TB24 985 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 TCEAL3Q969E4 200 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHKB-211ENST00000489453 MYRFLQ96LU7 910 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 CYP2S1Q96SQ9 504 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 SYT15Q9BQS2 421 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 DUSP15Q9H1R2 295 aaPredicted RBP11.13□□□□□ -0.63
CHKB-211ENST00000489453 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 RXFP3Q9NSD7 469 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
CHKB-211ENST00000489453 CIZ1Q9ULV3 898 aaPredicted RBP11.13□□□□□ -0.63
CHKB-211ENST00000489453 LAMA1P25391 3075 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 C2orf78A6NCI8 922 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 MYMKA6NI61 221 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 DCLK1O15075 740 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 KCNK5O95279 499 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 GRIK1P39086 918 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 MAGEA11P43364 429 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 WNT7BP56706 349 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 PSMC1P62191 440 aaKnown RBP11.12□□□□□ -0.63
CHKB-211ENST00000489453 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 KCNA1Q09470 495 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
CHKB-211ENST00000489453 EML3Q32P44 896 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 CFAP221Q4G0U5 840 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 USP49Q70CQ1 688 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 OSTM1Q86WC4 334 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 GPD1LQ8N335 351 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
CHKB-211ENST00000489453 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 TRPM5Q9NZQ8 1165 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 EBF1Q9UH73 591 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 INVSQ9Y283 1065 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 CLIC4Q9Y696 253 aa11.12□□□□□ -0.63
CHKB-211ENST00000489453 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
CHKB-211ENST00000489453 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 BCLAF3A2AJT9 711 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 C4orf47A7E2U8 309 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 TM4SF5O14894 197 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 TRIM66O15016 1216 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 KHNYNO15037 678 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 CLSTN1O94985 981 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 ABL1P00519 1130 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 PFKLP17858 780 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 PDCP20941 246 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 NOVA1P51513 510 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 CASP5P51878 434 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 SHC2P98077 582 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 CEBPZQ03701 1054 aaKnown RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 SURF1Q15526 300 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 C2orf27AQ580R0 203 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
CHKB-211ENST00000489453 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 VSTM1Q6UX27 236 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 CCDC65Q8IXS2 484 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 ZSWIM2Q8NEG5 633 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 DNAJC19Q96DA6 116 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 SPACA7Q96KW9 195 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
CHKB-211ENST00000489453 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms