RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TJP2Q9UDY2 1190 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 SLC4A7Q9Y6M7 1214 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 BUB1BO60566 1050 aaPredicted RBP22.05■■□□□ 1.12
SND1-214ENST00000489417 EFEMP2O95967 443 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 FAM200BP0CF97 657 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 MAMLD1Q13495 774 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 ZNF268Q14587 947 aaPredicted RBP22.05■■□□□ 1.12
SND1-214ENST00000489417 CTXN3Q4LDR2 81 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 ZNF280DQ6N043 979 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 PMF1Q6P1K2 205 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 DNAJC24Q6P3W2 148 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 SLFN11Q7Z7L1 901 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 DCP1BQ8IZD4 617 aaKnown RBP22.05■■□□□ 1.12
SND1-214ENST00000489417 SYCE1Q8N0S2 351 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 B3GALT6Q96L58 329 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 ZBED2Q9BTP6 218 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 SLC4A5Q9BY07 1137 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 ZCWPW1Q9H0M4 648 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 KRT82Q9NSB4 513 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 JRKLQ9Y4A0 524 aa22.05■■□□□ 1.12
SND1-214ENST00000489417 TCRBV5S1A1TA0A578 114 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 OR6C75A6NL08 312 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 H7C4K7 107 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 XPO1O14980 1071 aaKnown RBP22.04■■□□□ 1.12
SND1-214ENST00000489417 NPR3P17342 541 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 SNX16P57768 344 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 TAS1R1Q7RTX1 841 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 DAAM2Q86T65 1068 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 LRRTM3Q86VH5 581 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 XYLT1Q86Y38 959 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 HERC6Q8IVU3 1022 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 C3orf20Q8ND61 904 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 PHOSPHO2Q8TCD6 241 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 TTPALQ9BTX7 342 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 CYLDQ9NQC7 956 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 TMLHEQ9NVH6 421 aa22.04■■□□□ 1.12
SND1-214ENST00000489417 E5RJQ4 531 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 AP1G2O75843 785 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 FTCDO95954 541 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 PLA2G4AP47712 749 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 RTP2Q5QGT7 225 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 C11orf63Q6NUN7 778 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 CLEC20AQ6ZU45 233 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 TMEM110Q86TL2 294 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 RNF168Q8IYW5 571 aaPredicted RBP22.03■■□□□ 1.12
SND1-214ENST00000489417 FIBCD1Q8N539 461 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 FEZF2Q8TBJ5 459 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 SMARCD1Q96GM5 515 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 HSFY1Q96LI6 401 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 SPG21Q9NZD8 308 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 ANAPC7Q9UJX3 599 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 INSL6Q9Y581 213 aa22.03■■□□□ 1.12
SND1-214ENST00000489417 VWA8A3KMH1 1905 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 GOLGA8SH3BPF8 625 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 ENC1O14682 589 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 ATP1A1P05023 1023 aaKnown RBP22.02■■□□□ 1.12
SND1-214ENST00000489417 OR4Q2P0C623 313 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 ACADSBP45954 432 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 RPL34P49207 117 aaKnown RBP22.02■■□□□ 1.12
SND1-214ENST00000489417 CDR1P51861 262 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 TAP1Q03518 808 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 MESDQ14696 234 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 USP41Q3LFD5 358 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 PPP1R15BQ5SWA1 713 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 C4orf50Q6ZRC1 276 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 ANKS3Q6ZW76 656 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 MCRS1Q96EZ8 462 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 TMEM169Q96HH4 297 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 SELENOOQ9BVL4 669 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 VN1R3Q9BXE9 311 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 OXCT2Q9BYC2 517 aaPredicted RBP22.02■■□□□ 1.12
SND1-214ENST00000489417 GOLPH3Q9H4A6 298 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 ABCB6Q9NP58 842 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 AAASQ9NRG9 546 aa22.02■■□□□ 1.12
SND1-214ENST00000489417 TMEM110-MUSTN1A8MSY1 372 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 PIK3R2O00459 728 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 URI1O94763 535 aaPredicted RBP22.01■■□□□ 1.11
SND1-214ENST00000489417 GJB6O95452 261 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 ATP2A2P16615 1042 aaKnown RBP22.01■■□□□ 1.11
SND1-214ENST00000489417 MAP3K7CLP57077 242 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 SLC39A12Q504Y0 691 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 MEI1Q5TIA1 1274 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 OR6B2Q6IFH4 312 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 FAM183BPQ6ZVS7 135 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 PIGZQ86VD9 579 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 SPATA2LQ8IUW3 424 aaPredicted RBP22.01■■□□□ 1.11
SND1-214ENST00000489417 BTBD6Q96KE9 485 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 RAD9AQ99638 391 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 SMOQ99835 787 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 HERC2P3Q9BVR0 1158 aa22.01■■□□□ 1.11
SND1-214ENST00000489417 TMEM191CA6NGB0 347 aa22■■□□□ 1.11
SND1-214ENST00000489417 SIGLEC16A6NMB1 481 aa22■■□□□ 1.11
SND1-214ENST00000489417 NCK2O43639 380 aa22■■□□□ 1.11
SND1-214ENST00000489417 TBC1D4O60343 1298 aa22■■□□□ 1.11
SND1-214ENST00000489417 GABBR2O75899 941 aa22■■□□□ 1.11
SND1-214ENST00000489417 BEST1O76090 585 aa22■■□□□ 1.11
SND1-214ENST00000489417 BDNFP23560 247 aa22■■□□□ 1.11
SND1-214ENST00000489417 PPM1AP35813 382 aa22■■□□□ 1.11
SND1-214ENST00000489417 NFE2Q16621 373 aaPredicted RBP22■■□□□ 1.11
SND1-214ENST00000489417 RASIP1Q5U651 963 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms