RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KIF9Q9HAQ2 790 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 AGO4Q9HCK5 861 aaKnown RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 EXOC6BQ9Y2D4 811 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 PCDHGA8Q9Y5G5 932 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 COL27A1Q8IZC6 1860 aaPredicted RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 A0A1W2PQF6 199 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 METTL12A8MUP2 240 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 DDX39AO00148 427 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 RNF113AO15541 343 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 SIX3O95343 332 aaPredicted RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 AKAP5P24588 427 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 GRIN1Q05586 938 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 USP4Q13107 963 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 PLD1Q13393 1074 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 NAB2Q15742 525 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 BORAQ6PGQ7 559 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 PADI6Q6TGC4 694 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 CD300LGQ6UXG3 332 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 RHPN2Q8IUC4 686 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 C9orf43Q8TAL5 461 aaPredicted RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 TOE1Q96GM8 510 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 NLRP4Q96MN2 994 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 PIGSQ96S52 555 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 MXRA8Q9BRK3 442 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 GPR174Q9BXC1 333 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 MINDY3Q9H8M7 445 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 DUS2Q9NX74 493 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 WSB2Q9NYS7 404 aaPredicted RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 PARP2Q9UGN5 583 aa8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 PRRC2CQ9Y520 2896 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-206ENST00000489414 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 IGKV6-21A0A0C4DH24 114 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 EIF5BO60841 1220 aaKnown RBP8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 ITGAVP06756 1048 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 CD99P14209 185 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 WT1P19544 449 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 KLRB1Q12918 225 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 BFSP1Q12934 665 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 NR1H3Q13133 447 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 MTF1Q14872 753 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 TEAD4Q15561 434 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 TGIF1Q15583 401 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 LAYNQ6UX15 382 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 SKAP1Q86WV1 359 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 SMC5Q8IY18 1101 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 CLASRPQ8N2M8 674 aaKnown RBP8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 NSUN7Q8NE18 718 aaKnown RBP8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 RHPN1Q8TCX5 695 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 CUL5Q93034 780 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 PSMG2Q969U7 264 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 TDP1Q9NUW8 608 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 WDR70Q9NW82 654 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 KLK14Q9P0G3 267 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 ZMYM5Q9UJ78 669 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
EXOSC3-206ENST00000489414 OBSL1O75147 1896 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 HEATR9A2RTY3 570 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 KLRF2D3W0D1 207 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 I3L4J1 428 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 CYP26A1O43174 497 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 HMMRO75330 724 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 KAT7O95251 611 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 VNN2O95498 520 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 OATP04181 439 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 HOXB2P14652 356 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 CD1EP15812 388 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 AVPR1AP37288 418 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 MLLT3P42568 568 aaPredicted RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 EPHB3P54753 998 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 SHBQ15464 509 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 TARBP2Q15633 366 aaKnown RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 EGFLAMQ63HQ2 1017 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 DNAJB7Q7Z6W7 309 aaPredicted RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 EFCAB13Q8IY85 973 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 KBTBD3Q8NAB2 608 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 BEST2Q8NFU1 509 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 HPS3Q969F9 1004 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 CCDC51Q96ER9 411 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 HEXIM2Q96MH2 286 aaKnown RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 SEC62Q99442 399 aaKnown RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 KAT14Q9H8E8 782 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 ZNF106Q9H2Y7 1883 aaKnown RBP8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 PKDREJQ9NTG1 2253 aa8.23□□□□□ -1.09
EXOSC3-206ENST00000489414 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 PMS2P1A4D2B8 440 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 PTGESO14684 152 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 DHX15O43143 795 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 MARCH6O60337 910 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms