RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 MOSPD3O75425 235 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 HDCP19113 662 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 VIPR2P41587 438 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 NKX6-1P78426 367 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 HOXA4Q00056 320 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 SP2Q02086 613 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 E2F2Q14209 437 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 KHDC1LQ5JSQ8 128 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 TRIM72Q6ZMU5 477 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 PARS2Q7L3T8 475 aaKnown RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 PNLDC1Q8NA58 520 aaKnown RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 CYP2W1Q8TAV3 490 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 XAGE5Q8WWM1 108 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 GLG1Q92896 1179 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 CHMP4CQ96CF2 233 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 R3HDM4Q96D70 268 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 DAZAP1Q96EP5 407 aaKnown RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 ZNF48Q96MX3 618 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 MACROD1Q9BQ69 325 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 CCNL1Q9UK58 526 aaPredicted RBP4.35□□□□□ -1.71
CBWD1-216ENST00000489272 COL4A3BPQ9Y5P4 624 aa4.35□□□□□ -1.71
CBWD1-216ENST00000489272 H3BNC9 293 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 VCAM1P19320 739 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 AKAP5P24588 427 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 MMP13P45452 471 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 GPSM2P81274 684 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 CERKLQ49MI3 558 aaPredicted RBP4.34□□□□□ -1.71
CBWD1-216ENST00000489272 SLC2A7Q6PXP3 512 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 CATSPERGQ6ZRH7 1159 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 Q6ZWC4 215 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 CHSY1Q86X52 802 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 ASB2Q96Q27 587 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 NUP88Q99567 741 aaPredicted RBP4.34□□□□□ -1.71
CBWD1-216ENST00000489272 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 PCDH12Q9NPG4 1184 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 CNNM1Q9NRU3 951 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 PCDHA6Q9UN73 950 aa4.34□□□□□ -1.71
CBWD1-216ENST00000489272 CADPSQ9ULU8 1353 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 H7C1Q1 480 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 MYO1CO00159 1063 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 ADAMTS3O15072 1205 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
CBWD1-216ENST00000489272 DLDP09622 509 aaKnown RBP4.33□□□□□ -1.72
CBWD1-216ENST00000489272 CYP2C9P11712 490 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 LRPAP1P30533 357 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 ARHGAP25P42331 645 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 CCT4P50991 539 aaKnown RBP4.33□□□□□ -1.72
CBWD1-216ENST00000489272 PDE6CP51160 858 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 PLCD1P51178 756 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 TBC1D25Q3MII6 688 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 MTHFD1LQ6UB35 978 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 KIRREL2Q6UWL6 708 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 CNGA4Q8IV77 575 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 SMRP1Q8NCR6 262 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 ABHD11Q8NFV4 315 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 ZCRB1Q8TBF4 217 aaKnown RBP4.33□□□□□ -1.72
CBWD1-216ENST00000489272 C5orf34Q96MH7 638 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 MAP3K14Q99558 947 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 XPR1Q9UBH6 696 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 NDRG4Q9ULP0 352 aaKnown RBP4.33□□□□□ -1.72
CBWD1-216ENST00000489272 STXBP5LQ9Y2K9 1186 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
CBWD1-216ENST00000489272 SMIM35A0A1B0GVV1 85 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 KCNU1A8MYU2 1149 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 ERC2O15083 957 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 USP1O94782 785 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 TJP3O95049 919 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 XRCC6P12956 609 aaKnown RBP eCLIP4.32□□□□□ -1.72
CBWD1-216ENST00000489272 DEPDC1Q5TB30 811 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 SLC15A3Q8IY34 581 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 GRAMD1CQ8IYS0 662 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 CELF5Q8N6W0 485 aaKnown RBP4.32□□□□□ -1.72
CBWD1-216ENST00000489272 C8orf58Q8NAV2 365 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 SOCS4Q8WXH5 440 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 RITA1Q96K30 269 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 VPS16Q9H269 839 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 CXorf36Q9H7Y0 433 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 ANLNQ9NQW6 1124 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 TUBA8Q9NY65 449 aaPredicted RBP4.32□□□□□ -1.72
CBWD1-216ENST00000489272 GABRQQ9UN88 632 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 TMX2Q9Y320 296 aa4.32□□□□□ -1.72
CBWD1-216ENST00000489272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
CBWD1-216ENST00000489272 CYP2D7A0A087X1C5 515 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 POC1B-GALNT4F8VUJ3 575 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 UBE2Q2LH0YL09 131 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 hCG_1984214I3L0E3 225 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 PPEF2O14830 753 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 EXOC3O60645 756 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 ALDH2P05091 517 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 CHRM5P08912 532 aaPredicted RBP4.31□□□□□ -1.72
CBWD1-216ENST00000489272 SFPQP23246 707 aaKnown RBP eCLIP4.31□□□□□ -1.72
CBWD1-216ENST00000489272 UCP3P55916 312 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 WNT3P56703 355 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 KRT17Q04695 432 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 MYO1EQ12965 1108 aa4.31□□□□□ -1.72
CBWD1-216ENST00000489272 BRDTQ58F21 947 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms