RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ANKS3Q6ZW76 656 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 STX19Q8N4C7 294 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF512Q96ME7 567 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 PAFAH2Q99487 392 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 TMEM120AQ9BXJ8 343 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 CLCA2Q9UQC9 943 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 NCF1BA6NI72 391 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 NCF1CA8MVU1 366 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 RARGP13631 454 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 NCF1P14598 390 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 SCUBE1Q8IWY4 988 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 WHRNQ9P202 907 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 TRPC5OSA6NMA1 111 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 UBOX5O94941 541 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 CYBBP04839 570 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 BGNP21810 368 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 SOAT1P35610 550 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 MGAT5BQ3V5L5 792 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 LRRC6Q86X45 466 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 GPR75-ASB3A0A0A6YYF3 556 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
NPHP4-209ENST00000489180 POU4F1Q01851 419 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 PTK6Q13882 451 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 SUGP1Q8IWZ8 645 aaKnown RBP18.27■□□□□ 0.52
NPHP4-209ENST00000489180 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 ELMO3Q96BJ8 720 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 FAM136AQ96C01 138 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 DPP3Q9NY33 737 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 FAM205AQ6ZU69 1335 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 PRLRP16471 622 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 IER5Q5VY09 327 aa18.27■□□□□ 0.52
NPHP4-209ENST00000489180 RPS6KA5O75582 802 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 SUPT7LO94864 414 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 ALBP02768 609 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 ARP10275 920 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 MLH1P40692 756 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 AASDHQ4L235 1098 aaPredicted RBP18.27■□□□□ 0.51
NPHP4-209ENST00000489180 ZCWPW2Q504Y3 356 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 TFDP3Q5H9I0 405 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 RIC8BQ9NVN3 520 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 KBTBD4Q9NVX7 518 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 DNAJC16Q9Y2G8 782 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 TNPO2O14787 897 aaKnown RBP18.27■□□□□ 0.51
NPHP4-209ENST00000489180 MAGEB2O15479 319 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 KRT16P08779 473 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 RRM1P23921 792 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 FOPNLQ96NB1 174 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 PRMT7Q9NVM4 692 aaPredicted RBP18.27■□□□□ 0.51
NPHP4-209ENST00000489180 SCN3BQ9NY72 215 aa18.27■□□□□ 0.51
NPHP4-209ENST00000489180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.27■□□□□ 0.51
NPHP4-209ENST00000489180 GLRA3O75311 464 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 UPP2O95045 317 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 STIP1P31948 543 aaKnown RBP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 CDKAL1Q5VV42 579 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 HES6Q96HZ4 224 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 PAWRQ96IZ0 340 aaKnown RBP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 ECSITQ9BQ95 431 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 FAM83EQ2M2I3 478 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 GPR63Q9BZJ6 419 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 BRD8Q9H0E9 1235 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 CYP4F12Q9HCS2 524 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 F8VZ95 297 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 ITPK1Q13572 414 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 GTF2H3Q13889 308 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 MICU2Q8IYU8 434 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 C3orf20Q8ND61 904 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 FAM151AQ8WW52 585 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 L3MBTL3Q96JM7 780 aaPredicted RBP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 SNX13Q9Y5W8 968 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 FDFT1P37268 417 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 BOLA3Q53S33 107 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
NPHP4-209ENST00000489180 RIN3Q8TB24 985 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 PDP2Q9P2J9 529 aa18.26■□□□□ 0.51
NPHP4-209ENST00000489180 SMNDC1O75940 238 aaKnown RBP eCLIP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 USP1O94782 785 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 CYP2C9P11712 490 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 BMPR2Q13873 1038 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 ACOT1Q86TX2 421 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 MIER2Q8N344 545 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 BLOC1S5Q8TDH9 187 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 THUMPD3Q9BV44 507 aaKnown RBP18.25■□□□□ 0.51
NPHP4-209ENST00000489180 AKAP3O75969 853 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 PWP1Q13610 501 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 GALNTL6Q49A17 601 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 DENND1BQ6P3S1 775 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 IYDQ6PHW0 289 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 C4orf22Q6V702 233 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 CHSY1Q86X52 802 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 KAT2BQ92831 832 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 TUBGCP3Q96CW5 907 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
NPHP4-209ENST00000489180 DCDC2Q9UHG0 476 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms