RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 SHC4Q6S5L8 630 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 TRAPPC11Q7Z392 1133 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.8■■■□□ 2.04
RNF220-216ENST00000488865 EXOC4Q96A65 974 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 SPATA17Q96L03 361 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 RTKNQ9BST9 563 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 MAGEF1Q9HAY2 307 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 CRTAC1Q9NQ79 661 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 AGPAT3Q9NRZ7 376 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 UBE4BO95155 1302 aa27.8■■■□□ 2.04
RNF220-216ENST00000488865 CCDC163A0A0D9SF12 145 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 TGFB1I1O43294 461 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 CKMP06732 381 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 DRD1P21728 446 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 PSMC1P62191 440 aaKnown RBP27.79■■■□□ 2.04
RNF220-216ENST00000488865 ZNF77Q15935 545 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 CPA6Q8N4T0 437 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 OSCP1Q8WVF1 389 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 MYLPFQ96A32 169 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 SLC22A12Q96S37 553 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 CYP2S1Q96SQ9 504 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 DUS2Q9NX74 493 aaKnown RBP27.79■■■□□ 2.04
RNF220-216ENST00000488865 GCNT4Q9P109 453 aa27.79■■■□□ 2.04
RNF220-216ENST00000488865 FAM163BP0C2L3 166 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 PDIA4P13667 645 aaKnown RBP27.78■■■□□ 2.04
RNF220-216ENST00000488865 USP4Q13107 963 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 PKN3Q6P5Z2 889 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 CEP68Q76N32 757 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 MMS19Q96T76 1030 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 ECT2Q9H8V3 914 aa27.78■■■□□ 2.04
RNF220-216ENST00000488865 GREB1Q4ZG55 1949 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 ANAPC1Q9H1A4 1944 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 DLATP10515 647 aaKnown RBP27.77■■■□□ 2.04
RNF220-216ENST00000488865 TCF3P15923 654 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 PFKLP17858 780 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 BDNFP23560 247 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 GJA4P35212 333 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 PDE6CP51160 858 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 GALK1P51570 392 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 EHHADHQ08426 723 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 PSMD6Q15008 389 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 CSRP2Q16527 193 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 FBXO43Q4G163 708 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 UNC13DQ70J99 1090 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 RDH13Q8NBN7 331 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 MYCBPAPQ8TBZ2 947 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 SCFD1Q8WVM8 642 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 SNX21Q969T3 373 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 FNBP1Q96RU3 617 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 CGRRF1Q99675 332 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 P2RY13Q9BPV8 354 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 SEMA4GQ9NTN9 838 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 EHD2Q9NZN4 543 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 SLC8A2Q9UPR5 921 aa27.77■■■□□ 2.04
RNF220-216ENST00000488865 TACC1O75410 805 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 EGFP01133 1207 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 PDGFRBP09619 1106 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 TNNI1P19237 187 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 HOXC13P31276 330 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 GRIK1P39086 918 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 IFNAR2P48551 515 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 CYP24A1Q07973 514 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 DENND5BQ6ZUT9 1274 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 HS2ST1Q7LGA3 356 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 FAM160A2Q8N612 972 aaPredicted RBP27.76■■■□□ 2.03
RNF220-216ENST00000488865 ARL14EPQ8N8R7 260 aaPredicted RBP27.76■■■□□ 2.03
RNF220-216ENST00000488865 XXYLT1Q8NBI6 393 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 NETO1Q8TDF5 533 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 ATP2A3Q93084 1043 aa27.76■■■□□ 2.03
RNF220-216ENST00000488865 FBRSL1Q9HCM7 1045 aaKnown RBP27.76■■■□□ 2.03
RNF220-216ENST00000488865 CGNQ9P2M7 1197 aaKnown RBP27.76■■■□□ 2.03
RNF220-216ENST00000488865 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.76■■■□□ 2.03
RNF220-216ENST00000488865 C2orf78A6NCI8 922 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 POLR2DO15514 142 aaKnown RBP27.75■■■□□ 2.03
RNF220-216ENST00000488865 FOXD2O60548 495 aaPredicted RBP27.75■■■□□ 2.03
RNF220-216ENST00000488865 RNF40O75150 1001 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 CST3P01034 146 aaPredicted RBP27.75■■■□□ 2.03
RNF220-216ENST00000488865 HDCP19113 662 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 ANXA13P27216 316 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 GNL1P36915 607 aaPredicted RBP27.75■■■□□ 2.03
RNF220-216ENST00000488865 CYP27A1Q02318 531 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 KCNB1Q14721 858 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 EML3Q32P44 896 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 CAMKK1Q8N5S9 505 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 GAB3Q8WWW8 586 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 PCED1BQ96HM7 432 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 MRPL45Q9BRJ2 306 aaKnown RBP27.75■■■□□ 2.03
RNF220-216ENST00000488865 SNX25Q9H3E2 840 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 ARHGAP26Q9UNA1 814 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 NCOR2Q9Y618 2525 aa27.75■■■□□ 2.03
RNF220-216ENST00000488865 TRIM66O15016 1216 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 CLIC2O15247 247 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 CYP2J2P51589 502 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 BMT2Q1RMZ1 405 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 PRR23CQ6ZRP0 262 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 NELFCDQ8IXH7 590 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 C12orf56Q8IXR9 622 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 SH3RF2Q8TEC5 729 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 CCDC127Q96BQ5 260 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 TTLL2Q9BWV7 592 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms