RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 MED10Q9BTT4 135 aa18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 GANQ9H2C0 597 aa18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PNPLA8Q9NP80 782 aa18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 COMMD8Q9NX08 183 aa18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 USP15Q9Y4E8 981 aaPredicted RBP18.11■□□□□ 0.49
CDK5RAP1-214ENST00000488723 RNF225M0QZC1 329 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ZNF197O14709 1029 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 CCL16O15467 120 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FAM200BP0CF97 657 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ATF6P18850 670 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ANXA13P27216 316 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 SLC8A3P57103 927 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 APBA1Q02410 837 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 TFF2Q03403 129 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DRAP1Q14919 205 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ARHGAP44Q17R89 818 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FIGNQ5HY92 759 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PPP1R26Q5T8A7 1209 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DNAJB7Q7Z6W7 309 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 TTC9BQ8N6N2 239 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ANKRD52Q8NB46 1076 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 RNF214Q8ND24 703 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 TRMT2BQ96GJ1 504 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 MYRFLQ96LU7 910 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 LPIN3Q9BQK8 851 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 NUP58Q9BVL2 599 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DUSP16Q9BY84 665 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ZNF518BQ9C0D4 1074 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DMAP1Q9NPF5 467 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FAM207AQ9NSI2 230 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 USTQ9Y2C2 406 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FHOD1Q9Y613 1164 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DOCK6Q96HP0 2047 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 MYH10P35580 1976 aa18.1■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 MED7O43513 233 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 AP1G2O75843 785 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 KRT5P13647 590 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PTK2Q05397 1052 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ORC1Q13415 861 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 CLUL1Q15846 466 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 CCDC142Q17RM4 750 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 CYP4A22Q5TCH4 519 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 LCLAT1Q6UWP7 414 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 FAM49BQ9NUQ9 324 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 DNMT3BQ9UBC3 853 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 UXTQ9UBK9 157 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 PRKAG3Q9UGI9 489 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ZMYM5Q9UJ78 669 aa18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 ZFP37Q9Y6Q3 630 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP1-214ENST00000488723 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
CDK5RAP1-214ENST00000488723 SOBPA7XYQ1 873 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 F8VP50 259 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 O00370 1275 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CLDN5O00501 218 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 RHOP08100 348 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CCDC130P13994 396 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CD19P15391 556 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 NPR3P17342 541 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 PBX1P40424 430 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 KLK7P49862 253 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 JAM2P57087 298 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 RAPGEF1Q13905 1077 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 TAF12Q16514 161 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 DDR2Q16832 855 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 PABPC1LQ4VXU2 614 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 SARM1Q6SZW1 724 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 DENND5BQ6ZUT9 1274 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 GRASPQ7Z6J2 395 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 SCN4BQ8IWT1 228 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 APOL5Q9BWW9 433 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 PHF7Q9BWX1 381 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 LRRC3Q9BY71 257 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 GPR88Q9GZN0 384 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 ASAH2Q9NR71 780 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 KRT82Q9NSB4 513 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 IL37Q9NZH6 218 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 IFNKQ9P0W0 207 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 HESX1Q9UBX0 185 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 A0A0C4DFX4 3053 aa18.08■□□□□ 0.48
CDK5RAP1-214ENST00000488723 UNC80Q8N2C7 3258 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CLUHO75153 1309 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 C5orf42Q9H799 3197 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 NOTCH4Q99466 2003 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 F8VZ95 297 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 SOAT2O75908 522 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 RTN3O95197 1032 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 BMP1P13497 986 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 HMGA1P17096 107 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CLCN1P35523 988 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 PPP3CCP48454 512 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 BCAT1P54687 386 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 CLEC20AQ6ZU45 233 aa18.07■□□□□ 0.48
CDK5RAP1-214ENST00000488723 NUP93Q8N1F7 819 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms