RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 GUCD1Q96NT3 240 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 NAA15Q9BXJ9 866 aaKnown RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 EDEM3Q9BZQ6 932 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ELOVL4Q9GZR5 314 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 GANQ9H2C0 597 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 DPEP3Q9H4B8 488 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 PLEKHA4Q9H4M7 779 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 CEP72Q9P209 647 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 ITIH6Q6UXX5 1313 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 RNF225M0QZC1 329 aaPredicted RBP10.93□□□□□ -0.66
SKA1-204ENST00000488454 MED7O43513 233 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 NOL4O94818 638 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 PBX1P40424 430 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 ALDH1A3P47895 512 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 ZNF75DP51815 510 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 SLC8A3P57103 927 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 HYAL1Q12794 435 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 DUSP4Q13115 394 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 TRIM14Q14142 442 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 CCDC85BQ15834 202 aaPredicted RBP10.93□□□□□ -0.66
SKA1-204ENST00000488454 MGAT5BQ3V5L5 792 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 SGO2Q562F6 1265 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 FIGNQ5HY92 759 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 LILRA6Q6PI73 481 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 RTL10Q7L3V2 364 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 DRC7Q8IY82 874 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 EFHBQ8N7U6 833 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 C12orf29Q8N999 325 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 SLC4A11Q8NBS3 891 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 SLC22A17Q8WUG5 538 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 HDAC7Q8WUI4 952 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 CPLX3Q8WVH0 158 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 PPM1EQ8WY54 764 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 MYLPFQ96A32 169 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 CYFIP2Q96F07 1278 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 PCED1BQ96HM7 432 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 FUBP3Q96I24 572 aaKnown RBP eCLIP10.93□□□□□ -0.66
SKA1-204ENST00000488454 TWNKQ96RR1 684 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 NUCKS1Q9H1E3 243 aaKnown RBP10.93□□□□□ -0.66
SKA1-204ENST00000488454 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 CRTAC1Q9NQ79 661 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 HSFX1Q9UBD0 423 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 HMGXB4Q9UGU5 601 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 CNTN6Q9UQ52 1028 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 HCFC2Q9Y5Z7 792 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
SKA1-204ENST00000488454 MTMR11A4FU01 709 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 F8VZ95 297 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 EPHB6O15197 1021 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 CYP26A1O43174 497 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 AP5Z1O43299 807 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 THAP12O43422 761 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 LRG1P02750 347 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 EPCAMP16422 314 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 BDNFP23560 247 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 ANXA13P27216 316 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 ADORA2BP29275 332 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 GNA15P30679 374 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 SOX5P35711 763 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 GRIK1P39086 918 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 CDR1P51861 262 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 RPL10AP62906 217 aaKnown RBP10.92□□□□□ -0.66
SKA1-204ENST00000488454 PLD1Q13393 1074 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 STILQ15468 1287 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 TAF12Q16514 161 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 CFAP221Q4G0U5 840 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 PPM1LQ5SGD2 360 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 VSTM4Q8IW00 320 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 TCEAL8Q8IYN2 117 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 FAM71AQ8IYT1 594 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 UBR7Q8N806 425 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 ANP32BQ92688 251 aaKnown RBP10.92□□□□□ -0.66
SKA1-204ENST00000488454 MRFAP1L1Q96HT8 127 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 SEPT5Q99719 369 aaPredicted RBP10.92□□□□□ -0.66
SKA1-204ENST00000488454 B3GNT5Q9BYG0 378 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 PDCL3Q9H2J4 239 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 MAN1C1Q9NR34 630 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 TMLHEQ9NVH6 421 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 DZANK1Q9NVP4 752 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 CLDND1Q9NY35 253 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 HESX1Q9UBX0 185 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 AJAP1Q9UKB5 411 aaPredicted RBP10.92□□□□□ -0.66
SKA1-204ENST00000488454 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 CAPN11Q9UMQ6 739 aa10.92□□□□□ -0.66
SKA1-204ENST00000488454 LUC7L2Q9Y383 392 aaKnown RBP10.92□□□□□ -0.66
SKA1-204ENST00000488454 A0A1W2PQJ5 194 aa10.91□□□□□ -0.66
SKA1-204ENST00000488454 CLDN5O00501 218 aa10.91□□□□□ -0.66
SKA1-204ENST00000488454 AP1G2O75843 785 aa10.91□□□□□ -0.66
SKA1-204ENST00000488454 GFPT2O94808 682 aa10.91□□□□□ -0.66
SKA1-204ENST00000488454 SEC24AO95486 1093 aa10.91□□□□□ -0.66
SKA1-204ENST00000488454 ADCY5O95622 1261 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms