RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MTHFRP42898 656 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 MAGEA11P43364 429 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 ALDH1A3P47895 512 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 EPHB3P54753 998 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 MFAP3P55082 362 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 MRPS5P82675 430 aaKnown RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 SMAD2Q15796 467 aaKnown RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 AAK1Q2M2I8 961 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 GOLGA7BQ2TAP0 167 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 KLHDC7AQ5VTJ3 777 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 GET4Q7L5D6 327 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 HS6ST3Q8IZP7 471 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 SHC3Q92529 594 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 SMARCD1Q96GM5 515 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 RIPOR3Q96MK2 946 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 ERGIC2Q96RQ1 377 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 ZNF334Q9HCZ1 680 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 ACP6Q9NPH0 428 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 DNMT3BQ9UBC3 853 aaKnown RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 HSFX1Q9UBD0 423 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 AP1G2O75843 785 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 BEST1O76090 585 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 RHOP08100 348 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 TRIM21P19474 475 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ANXA13P27216 316 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 GRIK1P39086 918 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 CCR2P41597 374 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 POLR2FP61218 127 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 VEPH1Q14D04 833 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 FILIP1LQ4L180 1135 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 SGO2Q562F6 1265 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 VSTM1Q6UX27 236 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 CLEC20AQ6ZU45 233 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 RTL10Q7L3V2 364 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ENOSF1Q7L5Y1 443 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ATXN2LQ8WWM7 1075 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 NECTIN4Q96NY8 510 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 KCNK16Q96T55 309 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 SMOQ99835 787 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 DMAP1Q9NPF5 467 aaPredicted RBP11.72□□□□□ -0.53
UBE4B-210ENST00000488228 NLRC4Q9NPP4 1024 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 VCANP13611 3396 aa11.72□□□□□ -0.53
UBE4B-210ENST00000488228 SLC38A8A6NNN8 435 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 F8VZ95 297 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 O00370 1275 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 TRIM66O15016 1216 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 CYP26A1O43174 497 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 PAEPP09466 180 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 FAM200BP0CF97 657 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 MYL4P12829 197 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 GJA1P17302 382 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 CEBPBP17676 345 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 RFX1P22670 979 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 MAP3K7CLP57077 242 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 USP46P62068 366 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 DRAP1Q14919 205 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 GPRIN1Q7Z2K8 1008 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 ITIH5Q86UX2 942 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 ZMIZ2Q8NF64 920 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 NEK11Q8NG66 645 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 ITFG1Q8TB96 612 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 PSMG2Q969U7 264 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 TCEAL4Q96EI5 215 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 FAM81BQ96LP2 452 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 ZNF512Q96ME7 567 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.53
UBE4B-210ENST00000488228 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
UBE4B-210ENST00000488228 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms