RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CYP2A13Q16696 494 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 MGAT5BQ3V5L5 792 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 LONRF3Q496Y0 759 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 CYB5RLQ6IPT4 315 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 SWSAP1Q6NVH7 229 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 TAPT1Q6NXT6 567 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 PTF1AQ7RTS3 328 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 YAF2Q8IY57 180 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 SSH3Q8TE77 659 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 DPF1Q92782 380 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 GJA10Q969M2 543 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 NMD3Q96D46 503 aaKnown RBP4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 IQCDQ96DY2 449 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 MARS2Q96GW9 593 aaKnown RBP4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 CCDC138Q96M89 665 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 RPS6KC1Q96S38 1066 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 BRIP1Q9BX63 1249 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 ATP6V0A4Q9HBG4 840 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 STARD7Q9NQZ5 370 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 PHTF1Q9UMS5 762 aa4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P36-201ENST00000487709 ARID4BQ4LE39 1312 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 MBD3L4A6NDZ8 208 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 MBD3L3A6NE82 208 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 E7ENX8 843 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 TBX3O15119 743 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 RASSF9O75901 435 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 IDEP14735 1019 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 KCNA2P16389 499 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 HOXB6P17509 224 aaKnown RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 WNT3P56703 355 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 LOXL3P58215 753 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 RPS7P62081 194 aaKnown RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 TAP2Q03519 686 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 KRT17Q04695 432 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 GRM1Q13255 1194 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 DAG1Q14118 895 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 GPR162Q16538 588 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 GEN1Q17RS7 908 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 INSCQ1MX18 579 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 NOMO2Q5JPE7 1267 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 TSTD2Q5T7W7 516 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 BEND5Q7L4P6 421 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 GRASPQ7Z6J2 395 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 SRLQ86TD4 932 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 CFAP52Q8N1V2 620 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 FAM46DQ8NEK8 389 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 SARAFQ96BY9 339 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 MSLNLQ96KJ4 702 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 PPP1R9BQ96SB3 815 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 EIF2AQ9BY44 585 aaKnown RBP4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 ZCWPW1Q9H0M4 648 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 CPNE7Q9UBL6 633 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 HDAC9Q9UKV0 1011 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 SLC45A2Q9UMX9 530 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 RAD54BQ9Y620 910 aa4.54□□□□□ -1.68
HMGB1P36-201ENST00000487709 TRGV11A0A075B6L2 103 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 TRIM43BA6NCK2 446 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 RASA4BC9J798 803 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 KPNA5O15131 536 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 RASA4O43374 803 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 TRIAP1O43715 76 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 PRSS23O95084 383 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 KIF20AO95235 890 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 STT3AP46977 705 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 SLC11A2P49281 568 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 ANXA11P50995 505 aaKnown RBP4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 FMO1Q01740 532 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 SLFN5Q08AF3 891 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 SFRP4Q6FHJ7 346 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 AMIGO2Q86SJ2 522 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 MYLK4Q86YV6 388 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 LNX2Q8N448 690 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 CCDC150Q8NCX0 1101 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 PSD4Q8NDX1 1056 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 PARD3BQ8TEW8 1205 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 HASPINQ8TF76 798 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 SNX19Q92543 992 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 SPSB4Q96A44 273 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 TRIM43Q96BQ3 446 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 TBCBQ99426 244 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 COLEC11Q9BWP8 271 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 TLR10Q9BXR5 811 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 STK31Q9BXU1 1019 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 DPH1Q9BZG8 443 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 CERS4Q9HA82 394 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 XPR1Q9UBH6 696 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 ITGB1BP2Q9UKP3 347 aa4.53□□□□□ -1.68
HMGB1P36-201ENST00000487709 USP19O94966 1318 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 A0A087WWL8 130 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 POM121BA6NF01 834 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 PYCARD-AS1I3L0S3 204 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 ORC4O43929 436 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 VPS4BO75351 444 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms