RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 C9orf47Q6ZRZ4 202 aa3.77□□□□□ -1.81
SENP6-210ENST00000487548 PPP1R32Q7Z5V6 425 aa3.77□□□□□ -1.81
SENP6-210ENST00000487548 RP9Q8TA86 221 aaKnown RBP3.77□□□□□ -1.81
SENP6-210ENST00000487548 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
SENP6-210ENST00000487548 PPP1R10Q96QC0 940 aaKnown RBP3.77□□□□□ -1.81
SENP6-210ENST00000487548 CTAGE1Q96RT6 745 aa3.77□□□□□ -1.81
SENP6-210ENST00000487548 SIDT1Q9NXL6 827 aaKnown RBP3.77□□□□□ -1.81
SENP6-210ENST00000487548 PCDHA3Q9Y5H8 950 aa3.77□□□□□ -1.81
SENP6-210ENST00000487548 ERVV-2B6SEH9 535 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 FZD9O00144 591 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 AP4M1O00189 453 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 SMAD6O43541 496 aaKnown RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 EYA4O95677 639 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 RPLP2P05387 115 aaKnown RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 T-ENOLP0DO92 83 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 PXNP49023 591 aaPredicted RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 HTRA4P83105 476 aaPredicted RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 KIF22Q14807 665 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 NPY5RQ15761 445 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 FAM187BQ17R55 369 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 TBC1D25Q3MII6 688 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 AWAT1Q58HT5 328 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 ZNF628Q5EBL2 1059 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 DEPDC1Q5TB30 811 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 FAM160B1Q5W0V3 765 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 SFRP4Q6FHJ7 346 aaPredicted RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 ZNF549Q6P9A3 640 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 COLCA1Q6ZS62 124 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 TTC7BQ86TV6 843 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 OSR1Q8TAX0 266 aaPredicted RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 NSUN6Q8TEA1 469 aaKnown RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 SNX18Q96RF0 628 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 TRMOQ9BU70 441 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 DPCDQ9BVM2 203 aaPredicted RBP3.76□□□□□ -1.81
SENP6-210ENST00000487548 TXLNGQ9NUQ3 528 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 TTC3P53804 2025 aa3.76□□□□□ -1.81
SENP6-210ENST00000487548 B4DGG1 531 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 DCLK1O15075 740 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 VNN1O95497 513 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 AHSGP02765 367 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 PRDX5P30044 214 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 UBAP2Q5T6F2 1119 aaKnown RBP3.75□□□□□ -1.81
SENP6-210ENST00000487548 ZNF813Q6ZN06 617 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 PIM3Q86V86 326 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 KRT78Q8N1N4 520 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 CPA6Q8N4T0 437 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 ATL2Q8NHH9 583 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 FAM234AQ9H0X4 552 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 SLKQ9H2G2 1235 aaPredicted RBP3.75□□□□□ -1.81
SENP6-210ENST00000487548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.75□□□□□ -1.81
SENP6-210ENST00000487548 TFCP2L1Q9NZI6 479 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 PI4KBQ9UBF8 816 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 HEY2Q9UBP5 337 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 SERPINB13Q9UIV8 391 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 ICKQ9UPZ9 632 aa3.75□□□□□ -1.81
SENP6-210ENST00000487548 TRIM75PA6NK02 468 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 hCG_1984214I3L0E3 225 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 ENPP3O14638 875 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 RNF8O76064 485 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 LOXL3P58215 753 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 E2F1Q01094 437 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 LONRF3Q496Y0 759 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 MEX3CQ5U5Q3 659 aaKnown RBP3.74□□□□□ -1.81
SENP6-210ENST00000487548 COA7Q96BR5 231 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 SIGLEC11Q96RL6 698 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 PTDSS2Q9BVG9 487 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 HESX1Q9UBX0 185 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 ABCF2Q9UG63 623 aa3.74□□□□□ -1.81
SENP6-210ENST00000487548 MRPS17Q9Y2R5 130 aaKnown RBP3.74□□□□□ -1.81
SENP6-210ENST00000487548 TCRBV5S1A1TA0A578 114 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 KLHL33A6NCF5 533 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 TGFB3P10600 412 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 PIM1P11309 404 aaPredicted RBP3.73□□□□□ -1.81
SENP6-210ENST00000487548 ME1P48163 572 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 DSC2Q02487 901 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 TCF15Q12870 199 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 E2F2Q14209 437 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 TWIST1Q15672 202 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 RNASE12Q5GAN4 147 aaKnown RBP3.73□□□□□ -1.81
SENP6-210ENST00000487548 ANKRD13BQ86YJ7 626 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.73□□□□□ -1.81
SENP6-210ENST00000487548 CNTD1Q8N815 330 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 C3orf20Q8ND61 904 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 SLCO5A1Q9H2Y9 848 aa3.73□□□□□ -1.81
SENP6-210ENST00000487548 CFAP20Q9Y6A4 193 aaKnown RBP3.73□□□□□ -1.81
SENP6-210ENST00000487548 A1BGP04217 495 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 DLDP09622 509 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 ATXN1LP0C7T5 689 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 ADORA2AP29274 412 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 PPIFP30405 207 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 ID2Q02363 134 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 EXOSC9Q06265 439 aaKnown RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 FHL3Q13643 280 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 IQCB1Q15051 598 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 ABCB5Q2M3G0 1257 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 DAB2IPQ5VWQ8 1189 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 RNF219Q5W0B1 726 aaPredicted RBP3.72□□□□□ -1.81
SENP6-210ENST00000487548 LVRNQ6Q4G3 990 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 FAM90A1Q86YD7 464 aa3.72□□□□□ -1.81
SENP6-210ENST00000487548 C1orf162Q8NEQ5 155 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms