RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 GDF15Q99988 308 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 RHOXF2Q9BQY4 288 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 TMEM175Q9BSA9 504 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 RBM12Q9NTZ6 932 aaKnown RBP14.99□□□□□ -0.01
CUX1-209ENST00000487284 MARCH5Q9NX47 278 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 CYTH4Q9UIA0 394 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 RAB21Q9UL25 225 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 PCDHA3Q9Y5H8 950 aa14.99□□□□□ -0.01
CUX1-209ENST00000487284 MRPL42Q9Y6G3 142 aaKnown RBP14.99□□□□□ -0.01
CUX1-209ENST00000487284 TARSL2A2RTX5 802 aaKnown RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 TMEM189-UBE2V1I3L0A0 370 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 MYO1FO00160 1098 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 CYB561D2O14569 222 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 SPOPO43791 374 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PROSCO94903 275 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 ALDH2P05091 517 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 TUBBP07437 444 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 MARCKSL1P49006 195 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 BCAR1P56945 870 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 RBM10P98175 930 aaKnown RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 TAP1Q03518 808 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PPP1R15BQ5SWA1 713 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 DPH6Q7L8W6 267 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 TMEM173Q86WV6 379 aaPredicted RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 CPNE8Q86YQ8 564 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 C3orf20Q8ND61 904 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 KRT35Q92764 455 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PNKPQ96T60 521 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 LCMT1Q9UIC8 334 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 L1RE1Q9UN81 338 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 FAN1Q9Y2M0 1017 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 TMEM191CA6NGB0 347 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 M0QYV0 167 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 HUS1O60921 280 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 CAPN15O75808 1086 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 FAM163BP0C2L3 166 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 MAN1A1P33908 653 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 GPD2P43304 727 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 GABRB2P47870 512 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 CLUL1Q15846 466 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 ARHGAP17Q68EM7 881 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 DNAJC24Q6P3W2 148 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 CRYBG2Q8N1P7 616 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 TOP6BLQ8N6T0 577 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 RAD9AQ99638 391 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 COLEC11Q9BWP8 271 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 UBE2OQ9C0C9 1292 aaKnown RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 ARGLU1Q9NWB6 273 aaPredicted RBP14.98□□□□□ -0.01
CUX1-209ENST00000487284 WDR35Q9P2L0 1181 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 ADAM28Q9UKQ2 775 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 TSPAN16Q9UKR8 245 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 INSL6Q9Y581 213 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 PTPRDP23468 1912 aa14.98□□□□□ -0.01
CUX1-209ENST00000487284 LAMA3Q16787 3333 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 LCHNA4D1U4 455 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 TLL1O43897 1013 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 TADA2AO75478 443 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 SETSIPP0DME0 302 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 WARSP23381 471 aaKnown RBP14.97□□□□□ -0.01
CUX1-209ENST00000487284 ALDH7A1P49419 539 aaKnown RBP14.97□□□□□ -0.01
CUX1-209ENST00000487284 RGS19P49795 217 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 CLCN6P51797 869 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 PDCLQ13371 301 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 BRD3Q15059 726 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 PKDCCQ504Y2 493 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 CYP4A22Q5TCH4 519 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 WDR93Q6P2C0 686 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 KCNT2Q6UVM3 1135 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 ADGRF2Q8IZF7 708 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 FIBCD1Q8N539 461 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 C12orf29Q8N999 325 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 OR6B3Q8NGW1 331 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 BCL7CQ8WUZ0 217 aaPredicted RBP14.97□□□□□ -0.01
CUX1-209ENST00000487284 C18orf8Q96DM3 657 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 SUSD3Q96L08 255 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 DNAI2Q9GZS0 605 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 IP6K2Q9UHH9 426 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 TIMM13Q9Y5L4 95 aaPredicted RBP14.97□□□□□ -0.01
CUX1-209ENST00000487284 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
CUX1-209ENST00000487284 CCDC151A5D8V7 595 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 GRXCR1A8MXD5 290 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 A8MXQ7 604 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 CCDC188H7C350 402 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 M0QZQ0 153 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 HCRTO43612 131 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 GJB6O95452 261 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 ODC1P11926 461 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 RABGGTBP53611 331 aa14.96□□□□□ -0.01
CUX1-209ENST00000487284 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms