RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 LRRC74BQ6ZQY2 392 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 PDIK1LQ8N165 341 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL3A1-206ENST00000487010 TTC13Q8NBP0 860 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 RSAD2Q8WXG1 361 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 GPRASP2Q96D09 838 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 VCXQ9H320 206 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
COL3A1-206ENST00000487010 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
COL3A1-206ENST00000487010 CNTNAP2Q9UHC6 1331 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SMAPO00193 183 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 CST8O60676 142 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SMIM24O75264 130 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 TBX10O75333 385 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 TMEM63AO94886 807 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 IL1BP01584 269 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 PIGRP01833 764 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SKIP12755 728 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 BRD2P25440 801 aaKnown RBP12.78□□□□□ -0.36
COL3A1-206ENST00000487010 CCND2P30279 289 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 PRKCEQ02156 737 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SLC18A2Q05940 514 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 XRRA1Q6P2D8 792 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 CCDC62Q6P9F0 684 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 BBS12Q6ZW61 710 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 VSIG10LQ86VR7 867 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 WDTC1Q8N5D0 677 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 WDR60Q8WVS4 1066 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 APOPT1Q96IL0 206 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 SERAC1Q96JX3 654 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 CYTH2Q99418 400 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 MSTO1Q9BUK6 570 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 ZNF518BQ9C0D4 1074 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 STX18Q9P2W9 335 aaKnown RBP12.78□□□□□ -0.36
COL3A1-206ENST00000487010 XPO7Q9UIA9 1087 aaKnown RBP12.78□□□□□ -0.36
COL3A1-206ENST00000487010 KIAA1217Q5T5P2 1943 aa12.78□□□□□ -0.36
COL3A1-206ENST00000487010 MAFGO15525 162 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 RARBP10826 455 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 KCNA2P16389 499 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 BGNP21810 368 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.36
COL3A1-206ENST00000487010 CHRNA5P30532 468 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 RFC5P40937 340 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.36
COL3A1-206ENST00000487010 AP1B1Q10567 949 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 PTK7Q13308 1070 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 MTM1Q13496 603 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 RCN2Q14257 317 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 ZRSR2Q15696 482 aaKnown RBP12.77□□□□□ -0.36
COL3A1-206ENST00000487010 TAZQ16635 292 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 FAM91A1Q658Y4 838 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 GPAT2Q6NUI2 795 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.36
COL3A1-206ENST00000487010 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 TAB3Q8N5C8 712 aaPredicted RBP12.77□□□□□ -0.36
COL3A1-206ENST00000487010 LPAR1Q92633 364 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 KCNN1Q92952 543 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 TTC17Q96AE7 1141 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 ZWILCHQ9H900 591 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 CNTN3Q9P232 1028 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 STRIP2Q9ULQ0 834 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 POLIQ9UNA4 740 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 DOCK5Q9H7D0 1870 aa12.77□□□□□ -0.36
COL3A1-206ENST00000487010 A0A0B4J269 797 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 FCHO1O14526 889 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 MAP3K13O43283 966 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 NR3C2P08235 984 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 MYL2P10916 166 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 KDELR1P24390 212 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-206ENST00000487010 FAAP100Q0VG06 881 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 EMC2Q15006 297 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 TTC7BQ86TV6 843 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 CCDC60Q8IWA6 550 aaPredicted RBP12.77□□□□□ -0.37
COL3A1-206ENST00000487010 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 SLC44A1Q8WWI5 657 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 STMN2Q93045 179 aa12.77□□□□□ -0.37
COL3A1-206ENST00000487010 OXNAD1Q96HP4 312 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms