RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 RNF43Q68DV7 783 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 C4orf33Q8N1A6 199 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 CMASQ8NFW8 434 aaPredicted RBP12.94□□□□□ -0.34
PTCD2-204ENST00000486995 GRAMD1AQ96CP6 724 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 MRRFQ96E11 262 aaKnown RBP12.94□□□□□ -0.34
PTCD2-204ENST00000486995 WDR83Q9BRX9 315 aaKnown RBP12.94□□□□□ -0.34
PTCD2-204ENST00000486995 RNPEPQ9H4A4 650 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 SLC24A2Q9UI40 661 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
PTCD2-204ENST00000486995 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
PTCD2-204ENST00000486995 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 A0A1W2PPM1 405 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 HBP1O60381 514 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 CILPO75339 1184 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MICAL2O94851 1124 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ATP6V1G2O95670 118 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SLC25A27O95847 323 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ITGB3P05106 788 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MIPP30301 263 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 GABRB2P47870 512 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SLC26A2P50443 739 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 KCNJ2P63252 427 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ACVR2BQ13705 512 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 EFHC2Q5JST6 749 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 JADE1Q6IE81 842 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 FAM47EQ6ZV65 393 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 UNC45BQ8IWX7 931 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MCRS1Q96EZ8 462 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 TMEM176AQ96HP8 235 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 FAXDC2Q96IV6 333 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SMC6Q96SB8 1091 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MPHOSPH6Q99547 160 aaKnown RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SYNCQ9H7C4 482 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 PPCSQ9HAB8 311 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SENP1Q9P0U3 644 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 KLHL14Q9P2G3 628 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SMG5Q9UPR3 1016 aaKnown RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 TCRBV7S3A2A0A539 114 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 TYROBPO43914 113 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SSTR1P30872 391 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 GPD2P43304 727 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ECHDC2Q86YB7 292 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 KCTD6Q8NC69 237 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MAK16Q9BXY0 300 aaKnown RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 PDGFCQ9NRA1 345 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
PTCD2-204ENST00000486995 MGAMO43451 1857 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ANK1P16157 1881 aa12.93□□□□□ -0.34
PTCD2-204ENST00000486995 ADM5C9JUS6 153 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 C22orf31O95567 290 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 TRUB2O95900 331 aaKnown RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 TXNP10599 105 aaKnown RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 ARL4CP56559 192 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 GEMIN4P57678 1058 aaKnown RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 DNAJC3Q13217 504 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 SPARCL1Q14515 664 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 SLC1A5Q15758 541 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 RGS9BPQ6ZS82 235 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PYROXD1Q8WU10 500 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PRMT7Q9NVM4 692 aaPredicted RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 USP18Q9UMW8 372 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 STARD13Q9Y3M8 1113 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 E7ESA3 106 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 APOC4-APOC2K7ER74 178 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 APOC2P02655 101 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 EFTUD2Q15029 972 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 AMHR2Q16671 573 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 WLSQ5T9L3 541 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PNMA8AQ86V59 439 aaPredicted RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 RFX6Q8HWS3 928 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 TAB3Q8N5C8 712 aaPredicted RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 HSPH1Q92598 858 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 CLMNQ96JQ2 1002 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 DHRS4Q9BTZ2 278 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 VRTNQ9H8Y1 702 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 NOD2Q9HC29 1040 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 FETUBQ9UGM5 382 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 M0QYV0 167 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PIAS1O75925 651 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 TMEM63AO94886 807 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 RIPK1Q13546 671 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 KCTD2Q14681 263 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 ACAP1Q15027 740 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms