RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 MIER3Q7Z3K6 550 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 CDR2LQ86X02 465 aaPredicted RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 TXLNBQ8N3L3 684 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 CPA6Q8N4T0 437 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 KIF18AQ8NI77 898 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 LENG9Q96B70 501 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 UROC1Q96N76 676 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 NAP1L4Q99733 375 aaKnown RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 FAM124BQ9H5Z6 455 aaPredicted RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 DHX33Q9H6R0 707 aaKnown RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 CWC15Q9P013 229 aaKnown RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 SUSD2Q9UGT4 822 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 PPME1Q9Y570 386 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 HEMK1Q9Y5R4 338 aaPredicted RBP9.13□□□□□ -0.95
APTX-228ENST00000486724 AK5Q9Y6K8 562 aa9.13□□□□□ -0.95
APTX-228ENST00000486724 C2CD3Q4AC94 2353 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 A0A1B0GUA9 196 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 LAD1O00515 517 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 SYN3O14994 580 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 TBX3O15119 743 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 MSH4O15457 936 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 FLRT2O43155 660 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 B4GALT5O43286 388 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 MARCH6O60337 910 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 RECQL4O94761 1208 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 ZNF883P0CG24 379 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CPB1P15086 417 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 GCFC2P16383 781 aaKnown RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 GABRR2P28476 465 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 BRCC3P46736 316 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 ME1P48163 572 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 UCNP55089 124 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 TMPRSS3P57727 454 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 ATP2C1P98194 919 aaPredicted RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 TFDP1Q14186 410 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 PDGFRLQ15198 375 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 UPP1Q16831 310 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CTXN3Q4LDR2 81 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 ZNF280DQ6N043 979 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CC2D1AQ6P1N0 951 aaPredicted RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 MOXD1Q6UVY6 613 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CD300LGQ6UXG3 332 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 TMPRSS12Q86WS5 348 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 SPACA3Q8IXA5 215 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CCDC33Q8N5R6 958 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 CEP120Q8N960 986 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 SMG9Q9H0W8 520 aaKnown RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 DNAJC25Q9H1X3 360 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 TASP1Q9H6P5 420 aa9.12□□□□□ -0.95
APTX-228ENST00000486724 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
APTX-228ENST00000486724 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 KIF2AO00139 706 aaPredicted RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 TERTO14746 1132 aaKnown RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 CUTAO60888 179 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 ADCY5O95622 1261 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 TUBB4AP04350 444 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 GNSP15586 552 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 CIITAP33076 1130 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 MCM7P33993 719 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 HNF1BP35680 557 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 PRPHP41219 470 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 ALDH1A3P47895 512 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 USP11P51784 963 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 SEC13P55735 322 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 NPEPPSP55786 919 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 GPS2Q13227 327 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 MRPL58Q14197 206 aaKnown RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 MXD4Q14582 209 aaPredicted RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 EMC2Q15006 297 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 ZNF174Q15697 407 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 ARL6IP4Q66PJ3 421 aaKnown RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 PPP4R3AQ6IN85 833 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 RNF19BQ6ZMZ0 732 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 DEFB119Q8N690 84 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 KRI1Q8N9T8 703 aaKnown RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 RHBDD1Q8TEB9 315 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 HMGB4Q8WW32 186 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 TTC9Q92623 222 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 SLC5A5Q92911 643 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 FGF11Q92914 225 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 TMEM176AQ96HP8 235 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 HSPA12BQ96MM6 686 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 GCNAQ96QF7 691 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 RASSF4Q9H2L5 321 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 KIF9Q9HAQ2 790 aa9.11□□□□□ -0.95
APTX-228ENST00000486724 FEZ2Q9UHY8 353 aaPredicted RBP9.11□□□□□ -0.95
APTX-228ENST00000486724 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms