RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 ZNF618Q5T7W0 954 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 ZDHHC24Q6UX98 284 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 SRGAP1Q7Z6B7 1085 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 ZNF575Q86XF7 245 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 TIFAQ96CG3 184 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 HAPLN3Q96S86 360 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 SACM1LQ9NTJ5 587 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 PTGFRNQ9P2B2 879 aa6.53□□□□□ -1.36
LTN1-206ENST00000486427 TRIM43BA6NCK2 446 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 SLC16A3O15427 465 aaKnown RBP6.52□□□□□ -1.37
LTN1-206ENST00000486427 IL6RP08887 468 aaPredicted RBP6.52□□□□□ -1.37
LTN1-206ENST00000486427 XRCC6P12956 609 aaKnown RBP eCLIP6.52□□□□□ -1.37
LTN1-206ENST00000486427 WT1P19544 449 aaPredicted RBP6.52□□□□□ -1.37
LTN1-206ENST00000486427 KCNA3P22001 575 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 ADORA2AP29274 412 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 DGKEP52429 567 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 CACNB3P54284 484 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 FMO1Q01740 532 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 KRT17Q04695 432 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 CNGA2Q16280 664 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 C3orf38Q5JPI3 329 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 TEDDM1Q5T9Z0 273 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 DPY19L2P1Q6NXN4 242 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 ZNF551Q7Z340 670 aaPredicted RBP6.52□□□□□ -1.37
LTN1-206ENST00000486427 AMIGO2Q86SJ2 522 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 GLG1Q92896 1179 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 TRIM43Q96BQ3 446 aaPredicted RBP6.52□□□□□ -1.37
LTN1-206ENST00000486427 SARAFQ96BY9 339 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 ZNF518BQ9C0D4 1074 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 ARHGEF3Q9NR81 526 aa6.52□□□□□ -1.37
LTN1-206ENST00000486427 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
LTN1-206ENST00000486427 ISM1B1AKI9 464 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 MARCH6O60337 910 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 TLR5O60602 858 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 NXPH3O95157 252 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 FESP07332 822 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 MYF5P13349 255 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 RHCEP18577 417 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 DRD4P21917 467 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 CCT8P50990 548 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 ATXN1P54253 815 aaKnown RBP6.51□□□□□ -1.37
LTN1-206ENST00000486427 RHDQ02161 417 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 POLD3Q15054 466 aaPredicted RBP6.51□□□□□ -1.37
LTN1-206ENST00000486427 MGAT5BQ3V5L5 792 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 PLAC9Q5JTB6 97 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 DEPDC1Q5TB30 811 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 DARS2Q6PI48 645 aaKnown RBP6.51□□□□□ -1.37
LTN1-206ENST00000486427 SESTD1Q86VW0 696 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 BPIFB1Q8TDL5 484 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 SUCLG2Q96I99 432 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 PRDM11Q9NQV5 511 aa6.51□□□□□ -1.37
LTN1-206ENST00000486427 GCOM1H8Y6P7 765 aaPredicted RBP6.5□□□□□ -1.37
LTN1-206ENST00000486427 GOLIM4O00461 696 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 PEX2P28328 305 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 PDE6CP51160 858 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 PROK1P58294 105 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 FAM193AP78312 1265 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 PTCHD3Q3KNS1 767 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 NMD3Q96D46 503 aaKnown RBP6.5□□□□□ -1.37
LTN1-206ENST00000486427 R3HDM4Q96D70 268 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 APIPQ96GX9 242 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 GLOD4Q9HC38 313 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 A1CFQ9NQ94 594 aaKnown RBP6.5□□□□□ -1.37
LTN1-206ENST00000486427 DLL3Q9NYJ7 618 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 COL20A1Q9P218 1284 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 AFF4Q9UHB7 1163 aaKnown RBP6.5□□□□□ -1.37
LTN1-206ENST00000486427 PCDHGB6Q9Y5F9 930 aa6.5□□□□□ -1.37
LTN1-206ENST00000486427 A1L4Q6 167 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 H0YIZ8 118 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 PYCARD-AS1I3L0S3 204 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 GPD1P21695 349 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 FBLP22087 321 aaKnown RBP6.49□□□□□ -1.37
LTN1-206ENST00000486427 ALDH9A1P49189 494 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 RPS16P62249 146 aaKnown RBP6.49□□□□□ -1.37
LTN1-206ENST00000486427 SATB1Q01826 763 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 NHLH1Q02575 133 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 LY6KQ17RY6 165 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 PPP4R4Q6NUP7 873 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 TMEM171Q8WVE6 324 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 LRRC27Q9C0I9 530 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 CHPF2Q9P2E5 772 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 SNX14Q9Y5W7 946 aa6.49□□□□□ -1.37
LTN1-206ENST00000486427 MBD3L4A6NDZ8 208 aaPredicted RBP6.48□□□□□ -1.37
LTN1-206ENST00000486427 MBD3L3A6NE82 208 aaPredicted RBP6.48□□□□□ -1.37
LTN1-206ENST00000486427 PROP1O75360 226 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 VNN1O95497 513 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 MAP4K4O95819 1239 aaPredicted RBP6.48□□□□□ -1.37
LTN1-206ENST00000486427 ZKSCAN1P17029 563 aaPredicted RBP6.48□□□□□ -1.37
LTN1-206ENST00000486427 NDUFB7P17568 137 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 CYP2C18P33260 490 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 FAM153CQ494X1 144 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 SLC44A4Q53GD3 710 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 DGKHQ86XP1 1220 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 ABRAQ8N0Z2 381 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 OSCP1Q8WVF1 389 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 NELL1Q92832 810 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms