RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 CD48P09326 243 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 KRT3P12035 628 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 CD19P15391 556 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 MTM1Q13496 603 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 HIF1AQ16665 826 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 POLNQ7Z5Q5 900 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 EMC1Q8N766 993 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 CPT1BQ92523 772 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 STK38LQ9Y2H1 464 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 STARD13Q9Y3M8 1113 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 CA4P22748 312 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 SSTR1P30872 391 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 LACTBP83111 547 aaPredicted RBP18.4■□□□□ 0.54
TNXB-205ENST00000486148 IER5Q5VY09 327 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 SEPT1Q8WYJ6 367 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 WDR83Q9BRX9 315 aaKnown RBP18.4■□□□□ 0.54
TNXB-205ENST00000486148 MYLK2Q9H1R3 596 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
TNXB-205ENST00000486148 SSC5DA1L4H1 1573 aa18.4■□□□□ 0.54
TNXB-205ENST00000486148 SIGLEC16A6NMB1 481 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 TYROBPO43914 113 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 GJB1P08034 283 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 CCNB1P14635 433 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 EDNRBP24530 442 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 SLC18A1P54219 525 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 TFDP1Q14186 410 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 PDK4Q16654 411 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 MAPK6Q16659 721 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 PSMC3IPQ9P2W1 217 aaPredicted RBP18.39■□□□□ 0.54
TNXB-205ENST00000486148 RABGEF1Q9UJ41 708 aa18.39■□□□□ 0.54
TNXB-205ENST00000486148 MGAMO43451 1857 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 ZBTB42B2RXF5 422 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 LIN7AO14910 233 aaPredicted RBP18.39■□□□□ 0.53
TNXB-205ENST00000486148 B4GALT5O43286 388 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 FESP07332 822 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 FGFR1P11362 822 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 CDH8P55286 799 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
TNXB-205ENST00000486148 CCDC15Q0P6D6 951 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 MOGSQ13724 837 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 EFHC2Q5JST6 749 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 TRPM4Q8TD43 1214 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 MAF1Q9H063 256 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 R3HDMLQ9H3Y0 253 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 SLC24A2Q9UI40 661 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 STRIP2Q9ULQ0 834 aa18.39■□□□□ 0.53
TNXB-205ENST00000486148 TCRBV7S3A2A0A539 114 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 ARIH2O95376 493 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 KDELR1P24390 212 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 RPL22P35268 128 aaKnown RBP18.38■□□□□ 0.53
TNXB-205ENST00000486148 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 RGS9BPQ6ZS82 235 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 DEFB132Q7Z7B7 95 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 ZBTB8OSQ8IWT0 167 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 PPIL6Q8IXY8 311 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 NAT8LQ8N9F0 302 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 SENP1Q9P0U3 644 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 CHKBQ9Y259 395 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 WDR90Q96KV7 1748 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 UNC5CO95185 931 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
TNXB-205ENST00000486148 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
TNXB-205ENST00000486148 TAF5Q15542 800 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 EEF1DP3Q658K8 133 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 METTL7BQ6UX53 244 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 BBS12Q6ZW61 710 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 APOBEC3FQ8IUX4 373 aaKnown RBP18.38■□□□□ 0.53
TNXB-205ENST00000486148 METTL5Q9NRN9 209 aaKnown RBP18.38■□□□□ 0.53
TNXB-205ENST00000486148 PCSK1NQ9UHG2 260 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 SH3BP1Q9Y3L3 701 aa18.38■□□□□ 0.53
TNXB-205ENST00000486148 EDF1O60869 148 aaKnown RBP18.37■□□□□ 0.53
TNXB-205ENST00000486148 KRT19P08727 400 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 KRT4P19013 534 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 PROZP22891 400 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 MSH2P43246 934 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 ANKRD20A2Q5SQ80 823 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 ANKRD20A1Q5TYW2 823 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 ANKRD20A3Q5VUR7 823 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 UNC45BQ8IWX7 931 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 PYROXD1Q8WU10 500 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 ERP27Q96DN0 273 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 SDCBP2Q9H190 292 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 PTPRHQ9HD43 1115 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 EFR3BQ9Y2G0 817 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 FZD9O00144 591 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 AHCYL1O43865 530 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 TNNC2P02585 160 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 ERBB2P04626 1255 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 KRT7P08729 469 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 CCND1P24385 295 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 NRLP54845 237 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 RASA2Q15283 850 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 SURF1Q15526 300 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 TAZQ16635 292 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 HSDL1Q3SXM5 330 aa18.37■□□□□ 0.53
TNXB-205ENST00000486148 MPZL3Q6UWV2 235 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms