RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MAML2Q8IZL2 1156 aaPredicted RBP19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 ZFYVE19Q96K21 471 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 DPEP3Q9H4B8 488 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 TDP1Q9NUW8 608 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 NDRG2Q9UN36 371 aaKnown RBP19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 COL4A3Q01955 1670 aa19.64■□□□□ 0.73
PRPF40A-209ENST00000486100 TRIM66O15016 1216 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 LAMTOR5O43504 91 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 TADA3O75528 432 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 AKAP3O75969 853 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 SP9P0CG40 484 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 CCNE1P24864 410 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 ANXA13P27216 316 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 VAMP7P51809 220 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 KPNA1P52294 538 aaPredicted RBP19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 CDH8P55286 799 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 ADAM9Q13443 819 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 C1orf220Q5T0J3 134 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 DENND5BQ6ZUT9 1274 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 ENGASEQ8NFI3 743 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 USP13Q92995 863 aaPredicted RBP19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 NKD2Q969F2 451 aaPredicted RBP19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 KIF9Q9HAQ2 790 aa19.63■□□□□ 0.73
PRPF40A-209ENST00000486100 P4HA1P13674 534 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 ENPEPQ07075 957 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 PNOCQ13519 176 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 ZNF268Q14587 947 aaPredicted RBP19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 INTS8Q75QN2 995 aaKnown RBP19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 ASCL5Q7RTU5 278 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 TAF4BQ92750 862 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 SMYD3Q9H7B4 428 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 LMAN1LQ9HAT1 526 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 GKN1Q9NS71 199 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 RMND1Q9NWS8 449 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 GTSE1Q9NYZ3 720 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 EHD2Q9NZN4 543 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 FBXO4Q9UKT5 387 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 CCL26Q9Y258 94 aa19.62■□□□□ 0.73
PRPF40A-209ENST00000486100 PRR23AA6NEV1 266 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 F8VP50 259 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 CLSTN1O94985 981 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 PSMC2P35998 433 aaKnown RBP19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 EDRF1Q3B7T1 1238 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 ZNF528Q3MIS6 628 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 ZCWPW2Q504Y3 356 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 RALGPS2Q86X27 583 aaPredicted RBP19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 FAM186BQ8IYM0 893 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 TNIP3Q96KP6 325 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 GSDMAQ96QA5 445 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 CYP2S1Q96SQ9 504 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 FAM83CQ9BQN1 747 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 B3GNT5Q9BYG0 378 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 ELOVL4Q9GZR5 314 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 SEMA4AQ9H3S1 761 aa19.61■□□□□ 0.73
PRPF40A-209ENST00000486100 SPECC1L-ADORA2AF8WAN1 911 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 USP17L7P0C7H9 530 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 CHRNB1P11230 501 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 KRT13P13646 458 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 RAP1GAPP47736 663 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 SOX9P48436 509 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 MCCD1P59942 119 aaPredicted RBP19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 USP46P62068 366 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 NOP14P78316 857 aaKnown RBP19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TNK2Q07912 1038 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 MAMSTRQ6ZN01 415 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 SMYD4Q8IYR2 804 aaPredicted RBP19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TTC8Q8TAM2 541 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TIGD1Q96MW7 591 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TTLL2Q9BWV7 592 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 ZNF518BQ9C0D4 1074 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 SDCBP2Q9H190 292 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 CHRDQ9H2X0 955 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TRPC7Q9HCX4 862 aa19.6■□□□□ 0.73
PRPF40A-209ENST00000486100 TRAV19A0A0A6YYK7 116 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 CLDN5O00501 218 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 ASS1P00966 412 aaKnown RBP19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 HLA-DRAP01903 254 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 CTHP32929 405 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 PPP3CCP48454 512 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 CSTF1Q05048 431 aaKnown RBP19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 MTAPQ13126 283 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 ITPRIPL2Q3MIP1 535 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 ZNF658Q5TYW1 1059 aaPredicted RBP19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 ZC3H14Q6PJT7 736 aaKnown RBP19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 SCARA5Q6ZMJ2 495 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 SPATA20Q8TB22 786 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 SLC22A12Q96S37 553 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 IER2Q9BTL4 223 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 TRPM5Q9NZQ8 1165 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 GCNT4Q9P109 453 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 R4GN57 208 aa19.59■□□□□ 0.73
PRPF40A-209ENST00000486100 C2orf78A6NCI8 922 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 SMC2O95347 1197 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 PFKLP17858 780 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms