RNA–Protein interactions for RNA: ENST00000486086.1

GTF2IRD1-206, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 2

Gene GTF2IRD1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-206ENST00000486086 ULK2Q8IYT8 1036 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SPICE1Q8N0Z3 855 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SMCR8Q8TEV9 937 aaPredicted RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 THAP3Q8WTV1 239 aaPredicted RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 U2AF1L4Q8WU68 220 aaKnown RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 STAG1Q8WVM7 1258 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 RUFY2Q8WXA3 655 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ERCC4Q92889 916 aaPredicted RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 NKD2Q969F2 451 aaPredicted RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MKL1Q969V6 931 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 COA7Q96BR5 231 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MIEF2Q96C03 454 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CLIP3Q96DZ5 547 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CEP95Q96GE4 821 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 GPHA2Q96T91 129 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 NUP88Q99567 741 aaPredicted RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 FEZ1Q99689 392 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 PRRX2Q99811 253 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MYL10Q9BUA6 226 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 UPF3BQ9BZI7 483 aaKnown RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 NACAP1Q9BZK3 213 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 DHX36Q9H2U1 1008 aaKnown RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 HERC5Q9UII4 1024 aaKnown RBP4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ZNF112Q9UJU3 913 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ZHX2Q9Y6X8 837 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MCM3APO60318 1980 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 LRRC37A2A6NM11 1700 aa4.23□□□□□ -1.73
GTF2IRD1-206ENST00000486086 PLXNA1Q9UIW2 1896 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 IGKV6D-41A0A0C4DH26 115 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 TSPY2A6NKD2 308 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 E7EWF7 191 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 TNPO2O14787 897 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SGPL1O95470 568 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 PRLP01236 227 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 EEF2P13639 858 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 RXRAP19793 462 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SCNN1GP51170 649 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 TFAP4Q01664 338 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ROM1Q03395 351 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 PRKCZQ05513 592 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SPP2Q13103 211 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ALX1Q15699 326 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 DGKDQ16760 1214 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 IMMTQ16891 758 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 GAGE13Q4V321 117 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 AKNAD1Q5T1N1 836 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 GIMAP6Q6P9H5 292 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CASC1Q6TDU7 716 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ZNF627Q7L945 461 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 NECAB2Q7Z6G3 386 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MRGPRGQ86SM5 289 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 AMOTL1Q8IY63 956 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MB21D2Q8IYB1 491 aaPredicted RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 USP38Q8NB14 1042 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 OR5AN1Q8NGI8 311 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MAP4K1Q92918 833 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 GCDHQ92947 438 aaPredicted RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 MAML3Q96JK9 1138 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 PKNOX2Q96KN3 472 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 JAKMIP1Q96N16 626 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 DEFB118Q96PH6 123 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 GDF15Q99988 308 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 CPVLQ9H3G5 476 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SLC2A4RGQ9NR83 387 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 IL17RBQ9NRM6 502 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 FBXO28Q9NVF7 368 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ANAPC4Q9UJX5 808 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 ISY1Q9ULR0 285 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SNX14Q9Y5W7 946 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 C2CD3Q4AC94 2353 aa4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SPTAN1Q13813 2472 aaKnown RBP4.22□□□□□ -1.73
GTF2IRD1-206ENST00000486086 TNKSO95271 1327 aa4.21□□□□□ -1.73
GTF2IRD1-206ENST00000486086 FRMPD2Q68DX3 1309 aaPredicted RBP4.21□□□□□ -1.73
GTF2IRD1-206ENST00000486086 SPTBN2O15020 2390 aa4.21□□□□□ -1.73
GTF2IRD1-206ENST00000486086 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.73
GTF2IRD1-206ENST00000486086 FRYQ5TBA9 3013 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 CXCL11O14625 94 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 DVL2O14641 736 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 ZNF213O14771 459 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 ORC4O43929 436 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 CTNND1O60716 968 aaKnown RBP4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 LARGE1O95461 756 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 NDUFB10O96000 172 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 ASNSP08243 561 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 TSPY3P0CV98 308 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 TSPY8P0CW00 308 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 FOSL2P15408 326 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 VCAM1P19320 739 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 HSPA4P34932 840 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 MAN2A2P49641 1150 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 FLT3LGP49771 235 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 BPIFB4P59827 614 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 SNAP25P60880 206 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 SLC25A3Q00325 362 aa4.21□□□□□ -1.74
GTF2IRD1-206ENST00000486086 SLC6A3Q01959 620 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms