RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 SMAD2Q15796 467 aaKnown RBP25.09■■□□□ 1.61
ABCF3-216ENST00000485921 PPP1R26Q5T8A7 1209 aaPredicted RBP25.09■■□□□ 1.61
ABCF3-216ENST00000485921 NEK11Q8NG66 645 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 GPR152Q8TDT2 470 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 SMARCD1Q96GM5 515 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 NAA15Q9BXJ9 866 aaKnown RBP25.09■■□□□ 1.61
ABCF3-216ENST00000485921 KRT82Q9NSB4 513 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 HCFC1R1Q9NWW0 138 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 DNMT3BQ9UBC3 853 aaKnown RBP25.09■■□□□ 1.61
ABCF3-216ENST00000485921 KIAA1257Q9ULG3 409 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 ASB3Q9Y575 518 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 TRIM66O15016 1216 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 VDRP11473 427 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 USP8P40818 1118 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 DRAP1Q14919 205 aaPredicted RBP25.08■■□□□ 1.61
ABCF3-216ENST00000485921 PTPN21Q16825 1174 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 SGO2Q562F6 1265 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 ARHGAP17Q68EM7 881 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 DNAJB7Q7Z6W7 309 aaPredicted RBP25.08■■□□□ 1.61
ABCF3-216ENST00000485921 ITIH5Q86UX2 942 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 ASB2Q96Q27 587 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 CORO1BQ9BR76 489 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 TMEM30AQ9NV96 361 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 IFNKQ9P0W0 207 aa25.08■■□□□ 1.61
ABCF3-216ENST00000485921 F8VP50 259 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 FOXN3O00409 490 aaPredicted RBP25.07■■□□□ 1.6
ABCF3-216ENST00000485921 EPHB6O15197 1021 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 AP1G2O75843 785 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 IL9P15248 144 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 ANXA13P27216 316 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 POLR2FP61218 127 aaKnown RBP25.07■■□□□ 1.6
ABCF3-216ENST00000485921 NTHL1P78549 312 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 SMYD5Q6GMV2 418 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 GAS2L3Q86XJ1 694 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.07■■□□□ 1.6
ABCF3-216ENST00000485921 PSMG2Q969U7 264 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 C8orf48Q96LL4 319 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 STK33Q9BYT3 514 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 RBSNQ9H1K0 784 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 POMKQ9H5K3 350 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 WDR6Q9NNW5 1121 aaKnown RBP25.07■■□□□ 1.6
ABCF3-216ENST00000485921 DAAM1Q9Y4D1 1078 aa25.07■■□□□ 1.6
ABCF3-216ENST00000485921 A0A1W2PQC6 194 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 CALCAP01258 141 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 FAM200BP0CF97 657 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 TAF12Q16514 161 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 PABPC1LQ4VXU2 614 aaKnown RBP25.06■■□□□ 1.6
ABCF3-216ENST00000485921 HS6ST3Q8IZP7 471 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 TFAP2BQ92481 460 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 SPATA17Q96L03 361 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 KCNK16Q96T55 309 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 SMOQ99835 787 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 GPR88Q9GZN0 384 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 DMAP1Q9NPF5 467 aaPredicted RBP25.06■■□□□ 1.6
ABCF3-216ENST00000485921 PTPRDP23468 1912 aa25.06■■□□□ 1.6
ABCF3-216ENST00000485921 C2orf16Q68DN1 1984 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 SLC38A8A6NNN8 435 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 SLC34A2O95436 690 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 RHOP08100 348 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 STKLD1Q8NE28 680 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 CEP295NLQ96MC4 621 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 NLRC4Q9NPP4 1024 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 ASAH2Q9NR71 780 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 CLUHO75153 1309 aa25.05■■□□□ 1.6
ABCF3-216ENST00000485921 CYP26A1O43174 497 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 BEST1O76090 585 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 PNMA6AP0CW24 399 aaPredicted RBP25.04■■□□□ 1.6
ABCF3-216ENST00000485921 CSH1P0DML2 217 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 CSH2P0DML3 217 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 BMP1P13497 986 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 BRD2P25440 801 aaKnown RBP25.04■■□□□ 1.6
ABCF3-216ENST00000485921 MAP3K7CLP57077 242 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 MTMR3Q13615 1198 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 GOLGA7BQ2TAP0 167 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 CYP4A22Q5TCH4 519 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 FAM71AQ8IYT1 594 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 ZSWIM1Q9BR11 485 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 LRRC3Q9BY71 257 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 DUSP16Q9BY84 665 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 CSNK1G1Q9HCP0 422 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 AVENQ9NQS1 362 aaPredicted RBP25.04■■□□□ 1.6
ABCF3-216ENST00000485921 TSPAN16Q9UKR8 245 aa25.04■■□□□ 1.6
ABCF3-216ENST00000485921 O00370 1275 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 MYL4P12829 197 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 HMGA1P17096 107 aaKnown RBP25.03■■□□□ 1.6
ABCF3-216ENST00000485921 NPR3P17342 541 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 FSHRP23945 695 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 EPHA5P54756 1037 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 CNGA2Q16280 664 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 CLEC20AQ6ZU45 233 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 PDZD4Q76G19 769 aaPredicted RBP25.03■■□□□ 1.6
ABCF3-216ENST00000485921 TMC8Q8IU68 726 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 ANKRD52Q8NB46 1076 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 LEMD2Q8NC56 503 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 ZMIZ2Q8NF64 920 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 PHF7Q9BWX1 381 aaPredicted RBP25.03■■□□□ 1.6
ABCF3-216ENST00000485921 XPO4Q9C0E2 1151 aaKnown RBP25.03■■□□□ 1.6
ABCF3-216ENST00000485921 ZNF334Q9HCZ1 680 aaPredicted RBP25.03■■□□□ 1.6
ABCF3-216ENST00000485921 ACP6Q9NPH0 428 aa25.03■■□□□ 1.6
ABCF3-216ENST00000485921 MAGED2Q9UNF1 606 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms