RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HNRNPA1P09651 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMC4-217ENST00000485867 SFPQP23246 707 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMC4-217ENST00000485867 SMARCA1P28370 1054 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 OR1G1P47890 313 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 DRP2Q13474 957 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 TSNAXIP1Q2TAA8 658 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 FBLN7Q53RD9 439 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 HEATR6Q6AI08 1181 aaKnown RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 MPZL3Q6UWV2 235 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 NIPA1Q7RTP0 329 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 CATIPQ7Z7H3 387 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 MRPL10Q7Z7H8 261 aaKnown RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 MCATQ8IVS2 390 aaKnown RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 GPR65Q8IYL9 337 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 CTCFLQ8NI51 663 aaPredicted RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 ING5Q8WYH8 240 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 CCDC120Q96HB5 630 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 Q96M66 194 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 MAP3K14Q99558 947 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 SCNM1Q9BWG6 230 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 GCOM2Q9BZD3 368 aaPredicted RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 LMAN1LQ9HAT1 526 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 GABBR1Q9UBS5 961 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 ADAM30Q9UKF2 790 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 PCDHB2Q9Y5E7 798 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 PI4KAP42356 2102 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 A0A087WZ62 844 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 ERICH2A1L162 156 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 CCL16O15467 120 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 CHRNB1P11230 501 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 HOXA9P31269 272 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 ETV3P41162 512 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 CREMQ03060 361 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 DSC1Q08554 894 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 PPM1LQ5SGD2 360 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 LIN9Q5TKA1 542 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 FUT10Q6P4F1 479 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 CWC27Q6UX04 472 aaKnown RBP7.36□□□□□ -1.23
SMC4-217ENST00000485867 CATSPER4Q7RTX7 472 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 TMPRSS7Q7RTY8 843 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 SMAP1Q8IYB5 467 aaPredicted RBP7.36□□□□□ -1.23
SMC4-217ENST00000485867 ZNF654Q8IZM8 581 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 SPEM1Q8N4L4 309 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 SRBD1Q8N5C6 995 aaKnown RBP7.36□□□□□ -1.23
SMC4-217ENST00000485867 FAM3CQ92520 227 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 RILPL2Q969X0 211 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 LOXL4Q96JB6 756 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 LZTS2Q9BRK4 669 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 FDXACB1Q9BRP7 624 aaPredicted RBP7.36□□□□□ -1.23
SMC4-217ENST00000485867 ANO3Q9BYT9 981 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 GPR62Q9BZJ7 368 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 SMOC1Q9H4F8 434 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 AGPAT5Q9NUQ2 364 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 HCFC1R1Q9NWW0 138 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 SLAMF8Q9P0V8 285 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 KCNH3Q9ULD8 1083 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 TLR6Q9Y2C9 796 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 KIF26AQ9ULI4 1882 aaPredicted RBP7.36□□□□□ -1.23
SMC4-217ENST00000485867 ABCA7Q8IZY2 2146 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 LAMA1P25391 3075 aa7.36□□□□□ -1.23
SMC4-217ENST00000485867 IGLV3-22A0A075B6J6 115 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 hCG_1642624A0A1W2PR95 340 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 FAM86B1E9PN63 330 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 IPO5O00410 1097 aaKnown RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 DDAH1O94760 285 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 POU2F2P09086 479 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 FAM86B2P0C5J1 330 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 FCARP24071 287 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 HOXA6P31267 233 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 HOXC13P31276 330 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 SREBF1P36956 1147 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 RAP1GAPP47736 663 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 PRKCEQ02156 737 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 TRDNQ13061 729 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 USP41Q3LFD5 358 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 PABPC1LQ4VXU2 614 aaKnown RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 UBXN11Q5T124 520 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 ANKRD45Q5TZF3 282 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 TANGO2Q6ICL3 276 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 PRSS55Q6UWB4 352 aaPredicted RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 ZNF410Q86VK4 478 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 WDR5BQ86VZ2 330 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 PLA2G4DQ86XP0 818 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 ELSPBP1Q96BH3 223 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 INO80BQ9C086 356 aaPredicted RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 BRD9Q9H8M2 597 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 DIAPH3Q9NSV4 1193 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 C2orf42Q9NWW7 574 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 DNMT3BQ9UBC3 853 aaKnown RBP7.35□□□□□ -1.23
SMC4-217ENST00000485867 PCDHA10Q9Y5I2 948 aa7.35□□□□□ -1.23
SMC4-217ENST00000485867 GON4LQ3T8J9 2241 aa7.34□□□□□ -1.23
SMC4-217ENST00000485867 THADAQ6YHU6 1953 aa7.34□□□□□ -1.23
SMC4-217ENST00000485867 WASH4PA8MWX3 477 aa7.34□□□□□ -1.23
SMC4-217ENST00000485867 FOSP01100 380 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms