RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MICAL2O94851 1124 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 RTN3O95197 1032 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PAPLNO95428 1278 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 GLP2RO95838 553 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 OR4Q2P0C623 313 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 SLC9A1P19634 815 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 RAP1GAPP47736 663 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PDE6CP51160 858 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PTPN5P54829 565 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PSMC1P62191 440 aaKnown RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 CBX2Q14781 532 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 SYCP1Q15431 976 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 ARHGAP44Q17R89 818 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 ARHGAP15Q53QZ3 475 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 KLHDC7AQ5VTJ3 777 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PHLDB3Q6NSJ2 640 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 SYCE2Q6PIF2 218 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 TRIM67Q6ZTA4 783 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PDZD4Q76G19 769 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 LRRTM3Q86VH5 581 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 OSTM1Q86WC4 334 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 SCN4BQ8IWT1 228 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PLCD3Q8N3E9 789 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 TMEM130Q8N3G9 435 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PRSS33Q8NF86 280 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 MYLPFQ96A32 169 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PBXIP1Q96AQ6 731 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PCED1BQ96HM7 432 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 C8orf48Q96LL4 319 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 NOX5Q96PH1 765 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 ERGIC2Q96RQ1 377 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 STK33Q9BYT3 514 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 EDEM3Q9BZQ6 932 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 UBXN6Q9BZV1 441 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PDCL3Q9H2J4 239 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 FBXO44Q9H4M3 255 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 PNPLA8Q9NP80 782 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 DMAP1Q9NPF5 467 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
SF3A1-208ENST00000485618 DNAJC12Q9UKB3 198 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 YIPF1Q9Y548 306 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.017e-9■□□□□ 11
SF3A1-208ENST00000485618 CLUHO75153 1309 aa8.77□□□□□ -1.01
SF3A1-208ENST00000485618 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 SOBPA7XYQ1 873 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 LOC730098B7Z3J9 87 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CCL16O15467 120 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 ATP2C2O75185 946 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 RFPL2O75678 378 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 AP1G2O75843 785 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 SEC24AO95486 1093 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 ATP1A3P13637 1013 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 UCHL3P15374 230 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 BDNFP23560 247 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 FSHRP23945 695 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CYP2F1P24903 491 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CDC25CP30307 473 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 KRT9P35527 623 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 STAT1P42224 750 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 RAD23BP54727 409 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PLCB2Q00722 1185 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CNGA2Q16280 664 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 ARHGAP17Q68EM7 881 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 BMP8AQ7Z5Y6 402 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 DNAJB7Q7Z6W7 309 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 TADA2BQ86TJ2 420 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 NUP93Q8N1F7 819 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 C12orf76Q8N812 135 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 ANKRD52Q8NB46 1076 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 RBBP8NLQ8NC74 664 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 MSANTD4Q8NCY6 345 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 STKLD1Q8NE28 680 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PDZD8Q8NEN9 1154 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 SLC2A14Q8TDB8 520 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PSMG2Q969U7 264 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 RPGRIP1Q96KN7 1286 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 SLITRK1Q96PX8 696 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 TMEM209Q96SK2 561 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PHOX2BQ99453 314 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PKMYT1Q99640 499 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CORO1BQ9BR76 489 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 PHF7Q9BWX1 381 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 DUSP16Q9BY84 665 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 B3GNT5Q9BYG0 378 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 MIS12Q9H081 205 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 SDCBP2Q9H190 292 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 S1PR5Q9H228 398 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 DPEP3Q9H4B8 488 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 WDR6Q9NNW5 1121 aaKnown RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CRTAC1Q9NQ79 661 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 FAM207AQ9NSI2 230 aaPredicted RBP8.76□□□□□ -1.01
SF3A1-208ENST00000485618 GDE1Q9NZC3 331 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 MYO6Q9UM54 1294 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 CNTN6Q9UQ52 1028 aa8.76□□□□□ -1.01
SF3A1-208ENST00000485618 USTQ9Y2C2 406 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms