RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 RPGRIP1Q96KN7 1286 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 GANQ9H2C0 597 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 FOXN3O00409 490 aaPredicted RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 CYP26A1O43174 497 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 AP5Z1O43299 807 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 AP1G2O75843 785 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 RHOP08100 348 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 MYL4P12829 197 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 TPM4P67936 248 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
APTX-227ENST00000485479 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 GPRIN1Q7Z2K8 1008 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 ZMIZ2Q8NF64 920 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 SUSD6Q92537 303 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 SMOQ99835 787 aa12.61□□□□□ -0.39
APTX-227ENST00000485479 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 PIK3R2O00459 728 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 EPHB3P54753 998 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 MFAP3P55082 362 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 UBASH3AP57075 661 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 ITIH3Q06033 890 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 GOLGA7BQ2TAP0 167 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 UVSSAQ2YD98 709 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 PABPC1LQ4VXU2 614 aaKnown RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 DNAJB7Q7Z6W7 309 aaPredicted RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 SCAMP5Q8TAC9 235 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 UBA3Q8TBC4 463 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 TSPAN16Q9UKR8 245 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 DENND4AQ7Z401 1863 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 XYLBO75191 536 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 CAVIN2O95810 425 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 TUFMP49411 452 aaKnown RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 ELMSAN1Q6PJG2 1045 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 CLEC20AQ6ZU45 233 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 SLC47A2Q86VL8 602 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
APTX-227ENST00000485479 PLCB1Q9NQ66 1216 aa12.6□□□□□ -0.39
APTX-227ENST00000485479 CLUHO75153 1309 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 DOCK8Q8NF50 2099 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
APTX-227ENST00000485479 FAM163BP0C2L3 166 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 BMP1P13497 986 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 CEBPBP17676 345 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 HOXA9P31269 272 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 ZNF132P52740 706 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 CYP4F8P98187 520 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 ARID5AQ03989 594 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 TMC8Q8IU68 726 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 PASD1Q8IV76 773 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 C2orf15Q8WU43 125 aaKnown RBP12.59□□□□□ -0.39
APTX-227ENST00000485479 HDAC7Q8WUI4 952 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
APTX-227ENST00000485479 SHC3Q92529 594 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 PSMG2Q969U7 264 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 SMARCD1Q96GM5 515 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
APTX-227ENST00000485479 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 NAA15Q9BXJ9 866 aaKnown RBP12.59□□□□□ -0.39
APTX-227ENST00000485479 WDR6Q9NNW5 1121 aaKnown RBP12.59□□□□□ -0.39
APTX-227ENST00000485479 ABCB6Q9NP58 842 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
APTX-227ENST00000485479 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
APTX-227ENST00000485479 SLC38A8A6NNN8 435 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 F8VZ95 297 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 GFPT2O94808 682 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 SLC34A2O95436 690 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 HMGA1P17096 107 aaKnown RBP12.58□□□□□ -0.4
APTX-227ENST00000485479 GNA15P30679 374 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 GBP2P32456 591 aaPredicted RBP12.58□□□□□ -0.4
APTX-227ENST00000485479 CLCN1P35523 988 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
APTX-227ENST00000485479 SMARCB1Q12824 385 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 NR1I3Q14994 352 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 TAF12Q16514 161 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 PDZD4Q76G19 769 aaPredicted RBP12.58□□□□□ -0.4
APTX-227ENST00000485479 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 CMASQ8NFW8 434 aaPredicted RBP12.58□□□□□ -0.4
APTX-227ENST00000485479 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 MYADMQ96S97 322 aa12.58□□□□□ -0.4
APTX-227ENST00000485479 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms