RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 EBF3Q9H4W6 596 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 CRTAC1Q9NQ79 661 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 EHD2Q9NZN4 543 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 PTPRDP23468 1912 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 HCRTO43612 131 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 DRD1P21728 446 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 LMO2P25791 158 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 CYP24A1Q07973 514 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 MTF1Q14872 753 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 XXYLT1Q8NBI6 393 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 STKLD1Q8NE28 680 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 MYLPFQ96A32 169 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 RTKNQ9BST9 563 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 TTLL2Q9BWV7 592 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 C2orf42Q9NWW7 574 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 USP18Q9UMW8 372 aa12.26□□□□□ -0.45
SCFD1-206ENST00000484733 EP300Q09472 2414 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 OTOL1A6NHN0 477 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 FOXD2O60548 495 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ATP2C2O75185 946 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ZSCAN22P10073 491 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ARSAP15289 507 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 PPP3CCP48454 512 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 CCDC142Q17RM4 750 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 FBXO43Q4G163 708 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 TRIM68Q6AZZ1 485 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 C8orf48Q96LL4 319 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ARHGAP26Q9UNA1 814 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 MED19A0JLT2 244 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 TRIM66O15016 1216 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 AKAP3O75969 853 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 CST3P01034 146 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ATICP31939 592 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 GALK1P51570 392 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ATXN1P54253 815 aaKnown RBP12.25□□□□□ -0.45
SCFD1-206ENST00000484733 RESP18Q5W5W9 173 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 PRR23BQ6ZRT6 265 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 TMEM174Q8WUU8 243 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 LOXL4Q96JB6 756 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 FNBP1Q96RU3 617 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 ECT2Q9H8V3 914 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 FAM13BQ9NYF5 915 aa12.25□□□□□ -0.45
SCFD1-206ENST00000484733 HELZP42694 1942 aaKnown RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 POLR2DO15514 142 aaKnown RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 F13A1P00488 732 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 BDNFP23560 247 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 GJA4P35212 333 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 GNL1P36915 607 aaPredicted RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 NOP14P78316 857 aaKnown RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 SPEM2Q0P670 501 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 CSRP2Q16527 193 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 EML3Q32P44 896 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 HS2ST1Q7LGA3 356 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 CAMKK1Q8N5S9 505 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 SLC22A12Q96S37 553 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 P2RY13Q9BPV8 354 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 SNX25Q9H3E2 840 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 TRPC7Q9HCX4 862 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 DUS2Q9NX74 493 aaKnown RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 CDV3Q9UKY7 258 aaKnown RBP12.24□□□□□ -0.45
SCFD1-206ENST00000484733 PCDHA7Q9UN72 937 aa12.24□□□□□ -0.45
SCFD1-206ENST00000484733 CLIC2O15247 247 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 EGFP01133 1207 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 TNNI1P19237 187 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 GRIK1P39086 918 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 IFNAR2P48551 515 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 AP3M2P53677 418 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 PSMC1P62191 440 aaKnown RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 NR1H3Q13133 447 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 DENND5BQ6ZUT9 1274 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 GOLGA5Q8TBA6 731 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 NETO1Q8TDF5 533 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 GAB3Q8WWW8 586 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 PCED1BQ96HM7 432 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 CYP2S1Q96SQ9 504 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 MMS19Q96T76 1030 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 MRPL45Q9BRJ2 306 aaKnown RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 VRTNQ9H8Y1 702 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 TRPM5Q9NZQ8 1165 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 SLC8A2Q9UPR5 921 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 KIAA1549LQ6ZVL6 1849 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 C2orf78A6NCI8 922 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 CKMP06732 381 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 HDCP19113 662 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 ANXA13P27216 316 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 CYP2J2P51589 502 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 LPAL2Q16609 132 aa12.23□□□□□ -0.45
SCFD1-206ENST00000484733 KNOP1Q1ED39 458 aaKnown RBP12.23□□□□□ -0.45
SCFD1-206ENST00000484733 HEATR6Q6AI08 1181 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms