RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 GNL1P36915 607 aaPredicted RBP20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 RAP1GAPP47736 663 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 FNTBP49356 437 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 STK4Q13043 487 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 RUNX3Q13761 415 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 KMT5BQ4FZB7 885 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 CFAP221Q4G0U5 840 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 NAIF1Q69YI7 327 aaPredicted RBP20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 FAM171BQ6P995 826 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 DPH6Q7L8W6 267 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 MON1AQ86VX9 555 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 KIAA0895Q8NCT3 520 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 PLEKHO2Q8TD55 490 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 MSANTD3Q96H12 275 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 PCED1BQ96HM7 432 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 SPATA32Q96LK8 384 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 RCOR1Q9UKL0 485 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 WNT6Q9Y6F9 365 aa20.52■□□□□ 0.88
NDUFA3-213ENST00000484103 F5P12259 2224 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 TRAV19A0A0A6YYK7 116 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 PVALEFA0A1B0GWK0 134 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 CLDN5O00501 218 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 SCAMP3O14828 347 aaKnown RBP20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 KLRC4O43908 158 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 SLFN14P0C7P3 912 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 TDGF1P13385 188 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 USP46P62068 366 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 ATL3Q6DD88 541 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 RMDN1Q96DB5 314 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
NDUFA3-213ENST00000484103 A8MXQ7 604 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 F8VP50 259 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 PRR29P0C7W0 189 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 PDIA4P13667 645 aaKnown RBP20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 WEE1P30291 646 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 PXNP49023 591 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 CACNA2D1P54289 1103 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 NRLP54845 237 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 CDH8P55286 799 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 KCNB1Q14721 858 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 MTF1Q14872 753 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 BMT2Q1RMZ1 405 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 TDRD10Q5VZ19 366 aaKnown RBP20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 PKN3Q6P5Z2 889 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 SPEM1Q8N4L4 309 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 FSIP1Q8NA03 581 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 SPATA18Q8TC71 538 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 TRMT2BQ96GJ1 504 aaKnown RBP20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 FAM83CQ9BQN1 747 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 EPC1Q9H2F5 836 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 KIF9Q9HAQ2 790 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 POLR3BQ9NW08 1133 aaPredicted RBP20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 DENND4CQ5VZ89 1909 aa20.5■□□□□ 0.87
NDUFA3-213ENST00000484103 LRRIQ3A6PVS8 624 aaPredicted RBP20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 LILRB5O75023 590 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 USP17L7P0C7H9 530 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 PTPN1P18031 435 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 MAGEA11P43364 429 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 IFNAR2P48551 515 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 MLLT6P55198 1093 aaPredicted RBP20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 ORC1Q13415 861 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 MAPRE1Q15691 268 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 ZNF699Q32M78 642 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 CEP135Q66GS9 1140 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 C1orf228Q6PIY5 440 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 LIMS2Q7Z4I7 341 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 MYCBPAPQ8TBZ2 947 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 SH3RF2Q8TEC5 729 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 NELL1Q92832 810 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 CHFRQ96EP1 664 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 ZNF518BQ9C0D4 1074 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 DUS2Q9NX74 493 aaKnown RBP20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 RAB23Q9ULC3 237 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 USP18Q9UMW8 372 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 MAPK8IP1Q9UQF2 711 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 ZDHHC9Q9Y397 364 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 DMXL1Q9Y485 3027 aa20.49■□□□□ 0.87
NDUFA3-213ENST00000484103 EGFP01133 1207 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 DLG4P78352 724 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 KRT85P78386 507 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 FAM160A1Q05DH4 1040 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 CCINQ13939 588 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 FSTL4Q6MZW2 842 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 DENND5BQ6ZUT9 1274 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 SECISBP2LQ93073 1101 aaKnown RBP20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 MYRFLQ96LU7 910 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 IER2Q9BTL4 223 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 MED10Q9BTT4 135 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 FBRSL1Q9HCM7 1045 aaKnown RBP20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 SMPD4Q9NXE4 827 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 ZMYM5Q9UJ78 669 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 DCHS1Q96JQ0 3298 aa20.48■□□□□ 0.87
NDUFA3-213ENST00000484103 RPN1P04843 607 aaKnown RBP20.47■□□□□ 0.87
NDUFA3-213ENST00000484103 HDCP19113 662 aa20.47■□□□□ 0.87
NDUFA3-213ENST00000484103 NDUFA8P51970 172 aa20.47■□□□□ 0.87
NDUFA3-213ENST00000484103 SNRPFP62306 86 aaKnown RBP20.47■□□□□ 0.87
NDUFA3-213ENST00000484103 GRSF1Q12849 480 aaKnown RBP eCLIP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms