RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 RPA3P35244 121 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CRKP46108 304 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PFKPQ01813 784 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 NCOA4Q13772 614 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 STAT4Q14765 748 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ACAP1Q15027 740 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC1A5Q15758 541 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 C4orf33Q8N1A6 199 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PLEKHO2Q8TD55 490 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PRR12Q9ULL5 1215 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 SH3PXD2BA1X283 911 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ABHD2P08910 425 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CENPCQ03188 943 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PAOXQ6QHF9 649 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ST6GALNAC4Q9H4F1 302 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PCIF1Q9H4Z3 704 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CHST7Q9NS84 486 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 NDC80O14777 642 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 GYS1P13807 737 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 VPS72Q15906 364 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 SH3BP5LQ7L8J4 393 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 CASP10Q92851 521 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 GFM2Q969S9 779 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ARMCX1Q9P291 453 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 DMTF1Q9Y222 760 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ATRNL1Q5VV63 1379 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 C2orf71A6NGG8 1288 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 TISP43B9A030 160 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 PIK3CAP42336 1068 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ACTR3P61158 418 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 PTP4A2Q12974 167 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 LLGL1Q15334 1064 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ADRM1Q16186 407 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 MAPK6Q16659 721 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 TMEM214Q6NUQ4 689 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 CCDC62Q6P9F0 684 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ARHGAP24Q8N264 748 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 PPM1KQ8N3J5 372 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 FOXP3Q9BZS1 431 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 SENP6Q9GZR1 1112 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 COQ4Q9Y3A0 265 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 TRIM17Q9Y577 477 aa12.1□□□□□ -0.47
SEC61A1-205ENST00000483956 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 H3BRJ5 948 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 CBFA2T3O75081 653 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC1A1P43005 524 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 STT3AP46977 705 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC18A1P54219 525 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 NR1H3Q13133 447 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 MAML1Q92585 1016 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 RIT2Q99578 217 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 MYOCOSA0A1B0GUC4 107 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 B2RBV5 119 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 MATN2O00339 956 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 CIB2O75838 187 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 PLS3P13797 630 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 PEX2P28328 305 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 GPC3P51654 580 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 GTF2BQ00403 316 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 KLF1Q13351 362 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 CLEC16AQ2KHT3 1053 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms